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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.009G043200.1 |
Common Name | PHAVU_009G043200g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 389aa MW: 43429.8 Da PI: 6.5103 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.009G043200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 89 | 3.8e-28 | 229 | 289 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
+Dg++WrKYGqKe+ gs++prsYYrCt++ +C++kk v+r +++ +++e+tY+g+H+++
Phvul.009G043200.1 229 EDGFTWRKYGQKEILGSKYPRSYYRCTHQklyECQAKKMVQRLDHNANIFEVTYRGKHTCH 289
7****************************9999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 389 aa
Download sequence Send
to blast |
MFFLYSCFDF SLTTDTTPQH LHRSLVRTLH FQTHINIIIT TFLYFQISPH ENCKLLEAME 60 EVINSIHRAS ELIQRLEQDL PNMVNQPGTL SLSIDEITEA ITAAKEKLLL ISRHNQTSES 120 PPMLLHETTP QQPQMDATLM QEWLRSSHAL TMDQLFQMQQ RAARSSLQIG EMGGREVEDS 180 ERSMGSEGDQ GQGIHAPSRP RRRSREANQE KKKILVPAPQ FGNTEMPPED GFTWRKYGQK 240 EILGSKYPRS YYRCTHQKLY ECQAKKMVQR LDHNANIFEV TYRGKHTCHM SSTAPSSSSL 300 PLEQLLVDMT QSSNTISSQL SPSVNLSLLP GSGAAATTSG RGGASTSRFG ADYAVVDMAD 360 AMFNSGSSSG NNSMEFLFSP AEDKSDAN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015035 | 1e-152 | AP015035.1 Vigna angularis var. angularis DNA, chromosome 2, almost complete sequence, cultivar: Shumari. |