PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.009G043100.1
Common NamePHAVU_009G043100g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 283aa    MW: 32156.8 Da    PI: 4.8196
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.009G043100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY811.2e-25124184259
                         --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                         dD ++WrKYGqK++ +s+fprsY+rCt +   gC++ k+v+r +e+p++ +itY g H+++
  Phvul.009G043100.1 124 DDNHAWRKYGQKDILNSQFPRSYFRCTRKfeqGCKAMKQVQRLEENPDMYNITYIGLHTCK 184
                         8**************************98889***************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.1E-24115184IPR003657WRKY domain
SuperFamilySSF1182901.18E-23120184IPR003657WRKY domain
SMARTSM007741.8E-34123185IPR003657WRKY domain
PfamPF031061.1E-23124184IPR003657WRKY domain
PROSITE profilePS5081118.831124181IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009864Biological Processinduced systemic resistance, jasmonic acid mediated signaling pathway
GO:0010200Biological Processresponse to chitin
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MSKRVITELV LGLDYATQLK FLLQNPVGPD GSVAAKELVT NVQRSFAETL SLLTSSEAAS  60
GEDEVAQNLV ISGEDASQAA SIDIRSEDST ESRKRSLPLS KDRRGSYKRR KTEQTWSIVS  120
QTTDDNHAWR KYGQKDILNS QFPRSYFRCT RKFEQGCKAM KQVQRLEENP DMYNITYIGL  180
HTCKDTLKAP QMVTYETWDS FLENSHADLN VPNEQKQHDP PIRSQSPIVK QEYPNDESDP  240
TDADLWSDLK DFELSNEKPG FKIVSENADA FMFWLPEFGH EC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-23117184269OsWRKY45
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
192110RKRSLPLSKDRRGSYKRRK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00408DAPTransfer from AT3G56400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.009G043100.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007136415.10.0hypothetical protein PHAVU_009G043100g
TrEMBLV7AS640.0V7AS64_PHAVU; Uncharacterized protein
STRINGXP_007136415.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47003056
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.13e-44WRKY DNA-binding protein 70