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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G286100.1 |
Common Name | PHAVU_008G286100g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 506aa MW: 55215 Da PI: 7.1846 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G286100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 84.5 | 1e-26 | 114 | 170 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
+DgynWrKYGqK+vkg+ef rsYY+Ct+++C++kk++++s+ ++++++ + g+Hnh+
Phvul.008G286100.1 114 KDGYNWRKYGQKHVKGNEFIRSYYKCTYPNCQAKKQLQQSN-NGNITDCVSIGQHNHP 170
7***************************************9.***************8 PP
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2 | WRKY | 104.8 | 4.6e-33 | 288 | 346 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
++Dgy+WrKYGqK vkg+ +prsYYrC+ +gCpvkk+ver+++d k+v++tYeg+H+he
Phvul.008G286100.1 288 VNDGYRWRKYGQKLVKGNANPRSYYRCSNPGCPVKKHVERASHDSKIVITTYEGQHDHE 346
58********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009863 | Biological Process | salicylic acid mediated signaling pathway |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 506 aa
Download sequence Send
to blast |
MVSSDKSVDQ NTPSDKLQHR ASSDSDVTLS QGHDTKNVLS KPEGATSTPS VVAKNEEGKD 60 SDATACALES DQEGSTCSLP LEKHLQSPDT LLNELPPLQS SLESPSVIRE KVSKDGYNWR 120 KYGQKHVKGN EFIRSYYKCT YPNCQAKKQL QQSNNGNITD CVSIGQHNHP RPQLNSTVSV 180 ECVLPVVEQA ARKPLLANVK DKTSVEQGCI PQQIKPLQSL PPTQVSPVNE LKAAHSQLSK 240 ARNQVHDNED PESKRLKKDN SNADTTGVNM STRESRIVVQ TSSEVDLVND GYRWRKYGQK 300 LVKGNANPRS YYRCSNPGCP VKKHVERASH DSKIVITTYE GQHDHELPPG RTVTHNAATN 360 MNSTTMNGKA GTKSEDTVNR GEQSGLDSPS KLTEKLNGKS TTKSKVGDMV DFGGFSLSNE 420 GPEIKLKEQQ QKDNLGTKDD SVSNDVVCHS SSEVPCRSNE QLKGEVKPLS EGTKDCLSKV 480 AIHDTPSTES EFNKQSAPDA EPVQS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Binds to a 5'-CGTTGACCGAG-3' consensus core sequence which contains a W box, a frequently occurring elicitor-responsive cis-acting element. {ECO:0000269|PubMed:8972846}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By salicylic acid (SA). {ECO:0000269|PubMed:17264121}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |