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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G270500.1 |
Common Name | PHAVU_008G270500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 457aa MW: 50171.3 Da PI: 6.6708 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G270500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96.2 | 2.3e-30 | 238 | 296 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
Dg++WrKYGqK+ kg+++pr+YYrCt++ Cpv+k+v+r+aed +vv++tYeg+Hnh
Phvul.008G270500.1 238 ADGCQWRKYGQKMAKGNPCPRAYYRCTMSsACPVRKQVQRCAEDRSVVITTYEGQHNHA 296
7***************************999***************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 457 aa
Download sequence Send
to blast |
MEPSSNHAIP HPSSHPLLSF RGTPLHMDAL DFFPQKTKEI QDHDHTHHHQ TLHYHVDTSL 60 DLLTKNTGGN RSMEENEALE TVDEKSRFVA MVSELHQMNA ENQRLRELVD EMNNNCNALR 120 MQLINITQKQ HNQGNNGVSG EKEEMVPRPF LEMGVSEKEE QPSEEKVKVD LMHQCKGSDQ 180 KEIEDKLDCG RESSKARMEA DQQLSTKLSK LDQNSETLSM IKKARVSVRA RSDSTMIADG 240 CQWRKYGQKM AKGNPCPRAY YRCTMSSACP VRKQVQRCAE DRSVVITTYE GQHNHALPPT 300 AQAMAATTSA AASMLLSGSM PSSDGQINPT MLQSASLPCS QNMATLSASA PFPTITLDLT 360 QNPTNQLGLL SPLLARKFMS VPKIFGHSLC DQTKLAGLHE SQGRDSSPSF ANSFNAATAA 420 ITADPNFTAA LVAAITSVMG NSHNNSTGEE HCNNNA*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 1e-107 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |