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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G251300.2 |
Common Name | PHAVU_008G251300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 566aa MW: 61581.6 Da PI: 7.1695 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G251300.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.1 | 1.8e-33 | 225 | 282 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k
Phvul.008G251300.2 225 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGTHNHPK 282
8****************************************.***************85 PP
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2 | WRKY | 106.7 | 1.2e-33 | 396 | 454 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+
Phvul.008G251300.2 396 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 454
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010120 | Biological Process | camalexin biosynthetic process |
GO:0010200 | Biological Process | response to chitin |
GO:0010508 | Biological Process | positive regulation of autophagy |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:0070370 | Biological Process | cellular heat acclimation |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 566 aa
Download sequence Send
to blast |
MASSTGSLDT SATANSFTNF TFSTHPFMTT SFSDLLLSPT DTKPQGALSE RNASGVPKFK 60 STPPPSLPLS PPPISPSSYF AIPPGLSPAE LLDSPVLLSA SNILPSPTTG AFVSQNFNWK 120 SSSGGNQQIV KEEDKSFSNF SFQPQPRPPA SSTLTYQSSN VAVQNETTKQ DSFSSGKSMM 180 KTENSSSMHS FPPEIASVQT NHSNGFQSDF GNYPPQSQTL SRKSDDGYNW RKYGQKQVKG 240 SENPRSYYKC TYPNCPTKKK VERSLDGQIT EIVYKGTHNH PKPQSTRRNS SSSSSLAIPP 300 SNPISTEIQD QSYATHGSGQ MDSAATPDNS SISIGDDDFE QSSQKCKSGG DEYDEDEPEA 360 KRWKIEAENE GMSAPGSRTV REPRVVVQTT SDIDILDDGY RWRKYGQKVV KGNPNPRSYY 420 KCTHPGCPVR KHVERASHDL RAVITTYEGK HNHDVPAARG SGGHSVNRPL LNNAANPTTT 480 ATAIRPLAVT HPTDNSVQTQ RPQAPPEAQS PFTLEMLQGP GSFGFSGFGN PMGSYMNQQQ 540 LSDNVFSSRT KEEPRDDVFL ESLLC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}. |
Publications
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- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Zhang ZL, et al.
A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells. Plant Mol. Biol., 2009. 70(1-2): p. 139-51 [PMID:19199048] - Basu S,Roychoudhury A
Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance. Biomed Res Int, 2014. 2014: p. 706890 [PMID:25110688] - Zhang L, et al.
Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells. Plant Sci., 2015. 236: p. 214-22 [PMID:26025535]
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