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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G251300.1 |
Common Name | PHAVU_008G251300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 573aa MW: 62519.7 Da PI: 7.2021 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G251300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 106.1 | 1.9e-33 | 232 | 289 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k
Phvul.008G251300.1 232 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGTHNHPK 289
8****************************************.***************85 PP
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2 | WRKY | 106.7 | 1.2e-33 | 403 | 461 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+
Phvul.008G251300.1 403 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDLRAVITTYEGKHNHD 461
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009409 | Biological Process | response to cold |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:0009788 | Biological Process | negative regulation of abscisic acid-activated signaling pathway |
GO:0009938 | Biological Process | negative regulation of gibberellic acid mediated signaling pathway |
GO:0010120 | Biological Process | camalexin biosynthetic process |
GO:0010200 | Biological Process | response to chitin |
GO:0010508 | Biological Process | positive regulation of autophagy |
GO:0042742 | Biological Process | defense response to bacterium |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:0070370 | Biological Process | cellular heat acclimation |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 573 aa
Download sequence Send
to blast |
MASSTGSLDT SATANSFTNF TFSTHPFMTT SFSDLLLSPT DTKPQGALSE RNASGVPKFK 60 STPPPSLPLS PPPISPSSYF AIPPGLSPAE LLDSPVLLSA SNILPSPTTG AFVSQNFNWK 120 SSSGGNQQIV KEEDKSFSNF SFQPQPRPPA SSTLTYQSSN VAVQNQHPWN FQETTKQDSF 180 SSGKSMMKTE NSSSMHSFPP EIASVQTNHS NGFQSDFGNY PPQSQTLSRK SDDGYNWRKY 240 GQKQVKGSEN PRSYYKCTYP NCPTKKKVER SLDGQITEIV YKGTHNHPKP QSTRRNSSSS 300 SSLAIPPSNP ISTEIQDQSY ATHGSGQMDS AATPDNSSIS IGDDDFEQSS QKCKSGGDEY 360 DEDEPEAKRW KIEAENEGMS APGSRTVREP RVVVQTTSDI DILDDGYRWR KYGQKVVKGN 420 PNPRSYYKCT HPGCPVRKHV ERASHDLRAV ITTYEGKHNH DVPAARGSGG HSVNRPLLNN 480 AANPTTTATA IRPLAVTHPT DNSVQTQRPQ APPEAQSPFT LEMLQGPGSF GFSGFGNPMG 540 SYMNQQQLSD NVFSSRTKEE PRDDVFLESL LC*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator (PubMed:26025535). Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (PubMed:19199048, PubMed:26025535). Negative regulator of both gibberellic acid (GA) and abscisic acid (ABA) signaling in aleurone cells, probably by interfering with GAM1, via the specific repression of GA- and ABA-induced promoters (PubMed:15618416, PubMed:19199048, PubMed:26025535). {ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048, ECO:0000269|PubMed:26025535}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by abscisic acid (ABA) in aleurone cells, embryos, roots and leaves (PubMed:15618416, PubMed:19199048). Slightly down-regulated by gibberellic acid (GA) (PubMed:15618416). Accumulates in response to jasmonic acid (MeJA) (By similarity). {ECO:0000250|UniProtKB:Q6B6R4, ECO:0000269|PubMed:15618416, ECO:0000269|PubMed:19199048}. |
Publications
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- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Zhang ZL, et al.
A negative regulator encoded by a rice WRKY gene represses both abscisic acid and gibberellins signaling in aleurone cells. Plant Mol. Biol., 2009. 70(1-2): p. 139-51 [PMID:19199048] - Basu S,Roychoudhury A
Expression profiling of abiotic stress-inducible genes in response to multiple stresses in rice (Oryza sativa L.) varieties with contrasting level of stress tolerance. Biomed Res Int, 2014. 2014: p. 706890 [PMID:25110688] - Zhang L, et al.
Three WRKY transcription factors additively repress abscisic acid and gibberellin signaling in aleurone cells. Plant Sci., 2015. 236: p. 214-22 [PMID:26025535]
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