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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G246000.1 |
Common Name | PHAVU_008G246000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ERF |
Protein Properties |
Length: 281aa MW: 30843.2 Da PI: 6.0961 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G246000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 67.3 | 2.9e-21 | 124 | 174 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
s+++GVr+++ +grW+AeIrdp ++rkr +lg+f+taeeAa +++a+ kl+g
Phvul.008G246000.1 124 SKFRGVRQRP-WGRWAAEIRDP---NRRKRLWLGTFDTAEEAATEYDKAAVKLKG 174
79********.**********8...335************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 281 aa
Download sequence Send
to blast |
MSVHSTVNLH PMNLATPNSH FDDNPPCKTK TKTQKRLLRI IITDHDATDS DSDDEQQQNN 60 PKARKVKREI TQISMHLPLP DNSFSSCSYS SASASVSTCS SEQASKCRKP KKPPPSSEAA 120 NGRSKFRGVR QRPWGRWAAE IRDPNRRKRL WLGTFDTAEE AATEYDKAAV KLKGPNAVTN 180 FPLTTPPPAA ASPFAAIDSF STDGGASYSD LVASPTSVLT YDCDSTPFDS FPYGNVDALG 240 FHIDAPLSLA DVDVALTCHH GKEEEAFDEF DLDEFMKWPY *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |