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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G179200.1 |
Common Name | PHAVU_008G179200g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
ZF-HD |
Protein Properties |
Length: 262aa MW: 28416.7 Da PI: 6.9249 |
Description |
ZF-HD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G179200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | ZF-HD_dimer | 97.7 | 8.7e-31 | 52 | 108 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60
+vrY+eC+kNhA+s GghavDGC+Efmp+ ge+gt +a+ CaAC+CHRnFHR+e + e
Phvul.008G179200.1 52 AVRYRECQKNHAVSFGGHAVDGCCEFMPA-GEDGTLEAVICAACNCHRNFHRKEIDGE 108
69**************************9.999********************98765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009793 | Biological Process | embryo development ending in seed dormancy |
GO:0003677 | Molecular Function | DNA binding |
GO:0042803 | Molecular Function | protein homodimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 262 aa
Download sequence Send
to blast |
MEFDDQEEQE EEMGMPEPPV PAPVASYDSL GNSAARSKVG GEGRKGAFGA GAVRYRECQK 60 NHAVSFGGHA VDGCCEFMPA GEDGTLEAVI CAACNCHRNF HRKEIDGEMT SFHHRAQPPP 120 PPLHHHHQFS PYYHHRVPQH PAAAGYLHHH LATPPMAQHR PLALPAAASG GGLSREDEDI 180 SNPSSSGGGG GGGGGGGSKK RFRTKFTQEQ KDKMLAFAEQ LGWRIQKHDE SAVEQFCAET 240 NVERKVLKVW MHNNKNTLVC L*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 185 | 197 | SGGGGGGGGGGGS |
Functional Description ? help
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Source |
Description |
UniProt | Essential protein. Putative transcription factor. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015036 | 0.0 | AP015036.1 Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari. |