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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G133600.1 |
Common Name | PHAVU_008G133600g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
bHLH |
Protein Properties |
Length: 571aa MW: 61616.2 Da PI: 6.5122 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G133600.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 28 | 3.8e-09 | 380 | 427 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq
Phvul.008G133600.1 380 SHSLAERVRREKISERMKLLQDLVPGC----NKVTGKALMLDEIINYVQSLQ 427
8*************************9....677*****************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 571 aa
Download sequence Send
to blast |
MENHFFLNAA VPPQLHFHPS PPPCPPSWHS LSSPMDVQLL NSSTDRTQDC FYTPSWDKST 60 DHAVQFDSAL SSMVSSPAAS NSNMSSDNFV IRELIGKLGN IGGGGGSDEI SPHSQPLLGA 120 SSYINGNNST NTSCYSTPLS SPPKVNMNKI PSMMNHMVKE GVPPSLGTSM SLNSTVAEFS 180 ADPGFAERAA KFSCFGSRSF NGRTTQLGPN NPELTHRSSP LVENGKLPRV SSSPSLKVLG 240 SQMSAQENNN SPLQDQMEVA NSQEESTISE QIPNGDNGVK PSPYANSRKR KGPSKGKAKE 300 TSTPTNPPTA AEASEDSNAK RSKAEEGEGN ENGQVKAEEE SKGVTSNAND DKQNRSNSKP 360 PEAPKDYIHV RARRGQATDS HSLAERVRRE KISERMKLLQ DLVPGCNKVT GKALMLDEII 420 NYVQSLQRQV EFLSMKLASV NTRLDFSIES LISKDIFQSN NSLAHPIFPL DSSAPAFYGQ 480 HPQQNPAIHS NIPNGTVSHT SVDPLDTGLC QNLGMQLPHL NAFNEGASQY PITFSEDDLH 540 TIVQMGFGQT ANRKTPIQSQ SFNGSNQVPL *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031113 | 0.0 | KT031113.1 Glycine max clone HN_CCL_101 bHLH transcription factor (Glyma08g46040.1) mRNA, partial cds. |