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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G119400.1 |
Common Name | PHAVU_008G119400g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 312aa MW: 34500.5 Da PI: 6.5092 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G119400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 101.5 | 4.8e-32 | 125 | 181 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
dDgy+WrKYGqK++k+s++prsYYrCt ++C++kk+vers edp++++itYeg H h
Phvul.008G119400.1 125 DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSIEDPDTLIITYEGLHLH 181
8******************************************************99 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 312 aa
Download sequence Send
to blast |
MIESAMSKTM MEEVMATWSE GSEDDDLVKE LLDDGSPLLV LPQEAIQPPI TNASSSDHAF 60 NRFLSNIYSG PTISDIENAL SLNNQRDHFP PLSSPSRVSI LEKGLSKIEN KYTLKIKCFG 120 NGMGDDGYKW RKYGQKSIKN SPNPRSYYRC TNPRCSAKKQ VERSIEDPDT LIITYEGLHL 180 HFAYPYFLMG QPHQSQSHPP IKKSKPTSSQ GPAQAHRSDY VREAQETQTN ATSGVVPSTS 240 LDSPQDMAQP NMGSQGLLED MVPFMIRNPT NDVNSAHTKF SCSTFRSPPT SPLWGSNYST 300 SCYTVGLNSS T*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 1e-150 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |