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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G117400.1 |
Common Name | PHAVU_008G117400g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
C2H2 |
Protein Properties |
Length: 189aa MW: 21467.2 Da PI: 8.2277 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G117400.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 14 | 0.00015 | 42 | 64 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
y+C C+k Fs+ L H+++H
Phvul.008G117400.1 42 YSCYFCKKGFSNAQALGGHMNVH 64
99*******************99 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MSSCYFPFTC QRKMEFNTQN YKKSEIRWSS DDQGGPGQKK SYSCYFCKKG FSNAQALGGH 60 MNVHRKDRAM LKQSSEESLL SLDISIKTTS DHNNNGPSDL EEKILFRLGS GEDQKHARNC 120 KMPFNFPHKN DHDYAVERGM LIGTAEIPHL PSFVLGQRIE EKKADLDLEL RLGLHPQESA 180 TLNTRSFF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |