PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G065600.1
Common NamePHAVU_008G065600g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family BES1
Protein Properties Length: 701aa    MW: 78289.9 Da    PI: 5.5139
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G065600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822143.12.5e-44782151131
              DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr...kgskpl...eeaeaagss 85 
                         gg++r+++ +E+E++k+RERrRRai+a+i+aGLR++Gny+l++raD+n+V++AL+reAGwvv +DGtt++   +g+kp    ++  +  ss
  Phvul.008G065600.1  78 GGTRRSRPVEEKERTKLRERRRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTTFPsrsQGQKPAggnSTIVTSSSS 168
                         5899*****************************************************************9888999999743333334444 PP

              DUF822  86 asaspesslq.sslkssalaspvesysaspksssfpspssldsisla 131
                         + as+++++  ++ ++s  +sp+e +++      +psp +l+s+s +
  Phvul.008G065600.1 169 HVASQQTPSPsLRGVASGHRSPLEYSASKGVFMPTPSPYNLSSTSRS 215
                         44777777765777788888888877776666666666666665543 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056879.2E-4079215IPR008540BES1/BZR1 plant transcription factor, N-terminal
SuperFamilySSF514451.9E-178259696IPR017853Glycoside hydrolase superfamily
Gene3DG3DSA:3.20.20.802.4E-194260694IPR013781Glycoside hydrolase, catalytic domain
PfamPF013736.2E-101266685IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64297311IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64318336IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64340361IPR001554Glycoside hydrolase, family 14
PRINTSPR008423.1E-6423432IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR007503.3E-64433455IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64506525IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64540556IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64557568IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64575598IPR001554Glycoside hydrolase, family 14
PRINTSPR007503.3E-64615637IPR001554Glycoside hydrolase, family 14
PRINTSPR008423.1E-6666680IPR001371Glycoside hydrolase, family 14B, plant
PRINTSPR008423.1E-6681695IPR001371Glycoside hydrolase, family 14B, plant
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000272Biological Processpolysaccharide catabolic process
GO:0048831Biological Processregulation of shoot system development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0016161Molecular Functionbeta-amylase activity
Sequence ? help Back to Top
Protein Sequence    Length: 701 aa     Download sequence    Send to blast
MATDMQRLVG TSEDDEEMGM DVKDEDEEDD DYEENGGEQG NASGMVGIDG GNEMGTATGD  60
NRFPQHQQFH EQVGTPGGGT RRSRPVEEKE RTKLRERRRR AITARILAGL RRHGNYNLRV  120
RADINDVIAA LAREAGWVVL PDGTTFPSRS QGQKPAGGNS TIVTSSSSHV ASQQTPSPSL  180
RGVASGHRSP LEYSASKGVF MPTPSPYNLS STSRSQTSIV GDGEAQRDNR PLIGGSMDNA  240
DEKQIADLPP RLPERDLAGS PYVPVYVMLP LGVINIKCEL VDPDGLLKQL RVLKSVHVDG  300
VMVDCWWGIV EAHAPQEYTW NGYKRLFQMV REVKLKLQVV MSFHECGGNF GDDVCIPLPH  360
WVAEIGRSNP DIFFTDREGR HNPECLSWGI DKERVLRGRT AVEVYFDFMR SFRVEFDEYF  420
EDGLISMVEV GLGPCGELRY PSCPVKHGWR YPGIGEFQCY DQYMLKSLRK AAEARGHAIW  480
ARGPDNAGTY NSQPHETGFF CDGGDYDGFY GRFFLSWYSQ VLVDHGNRVL SLAKLAFEGS  540
CVTAKLSGIY WWYKTASHAA ELTAGYYNPC NRDGYAAILT MLKINGVSLN IPCVELHTLN  600
QHEGFPETFA DPEGLVWQVL NAGWDVDLPV TSQNGFPCLN RVSYNKVLDH AKPMNDPDGR  660
HFSSFTYLRL SPVLMERQNF IEFERFVKRM HGEAVLDLQV *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1v3i_A1e-14626269311444Beta-amylase
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G065600.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007139874.10.0hypothetical protein PHAVU_008G065600g
SwissprotO808310.0BAM7_ARATH; Beta-amylase 7
TrEMBLV7B4S80.0V7B4S8_PHAVU; Beta-amylase
STRINGXP_007139874.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF108833339
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.10.0beta-amylase 7
Publications ? help Back to Top
  1. Soyk S, et al.
    The Enzyme-Like Domain of Arabidopsis Nuclear β-Amylases Is Critical for DNA Sequence Recognition and Transcriptional Activation.
    Plant Cell, 2014. 26(4): p. 1746-1763
    [PMID:24748042]