PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.008G054100.1
Common NamePHAVU_008G054100g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family WRKY
Protein Properties Length: 715aa    MW: 78008.6 Da    PI: 6.281
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.008G054100.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.81.9e-32236292259
                         --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         +DgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ d++++ei+Y+g+Hnh 
  Phvul.008G054100.1 236 EDGYNWRKYGQKQVKGSEYPRSYYKCTQPNCQVKKKVERSH-DGQITEIIYKGNHNHV 292
                         7****************************************.***************6 PP

2WRKY102.81.9e-32449507159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                         ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver++++ k+v +tYeg+Hnhe
  Phvul.008G054100.1 449 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHNLKFVLTTYEGKHNHE 507
                         59********************************************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.3E-28227294IPR003657WRKY domain
PROSITE profilePS5081123.652230294IPR003657WRKY domain
SuperFamilySSF1182901.7E-24233294IPR003657WRKY domain
SMARTSM007742.3E-35235293IPR003657WRKY domain
PfamPF031067.5E-25236291IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.6E-35434509IPR003657WRKY domain
SuperFamilySSF1182909.42E-28442509IPR003657WRKY domain
PROSITE profilePS5081137.264444509IPR003657WRKY domain
SMARTSM007748.5E-37449508IPR003657WRKY domain
PfamPF031061.4E-24450507IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    Send to blast
MEHDDLNNNQ NKNCNEESLV SESNGAKRSI AERRGFNSNA AQINTALFRT ATSTTPSPSP  60
AARSPRLTIP PGISPTALLG SPIMLPNSQA VPSSPTTGSF FMMPPLPQES NPLLPPYSAP  120
LNQVSSNFHS IKGGNRESQP LAQVQSPLDF SFPADFSKGH SVKNSEVNSY NDIEMVNDAI  180
VNANNVEMPM SGSEEVSDES AVPKNGINGE DIGGRPAPEG ELKEASHATG VVRTSEDGYN  240
WRKYGQKQVK GSEYPRSYYK CTQPNCQVKK KVERSHDGQI TEIIYKGNHN HVKPHSTHRG  300
SALSTDEVSD MAEEGALAKV DGGFMWRNVQ SGLKDSKNSL DWKGDGQERT SSTSVVTEIS  360
DPISTNKAKS LSMFESEETP ELSSTLASHD MEEDGTTQAL ALVEDEAEND ESEPKRRKKE  420
SYAVESTLPP RSVREPRVVV QIESEVDILD DGYRWRKYGQ KVVKGNPNPR SYYKCTSAGC  480
TVRKHVERAS HNLKFVLTTY EGKHNHEVPT ARTNNQINTS DGGLPPNGVN GQVALALPGN  540
AGIKAETHQT LAHHFDRKPE FSNEFLRPSL IGSFNNDMKF GPSSLCQMKY PSLNNTMPYG  600
YAMNPDRCAA PQAGSIASMF PDFPMPLPLN LPSSGKFSIS GLNFNCAKPI NPIQSFLSGQ  660
QVKDIDTVFL RPKQEQKDDT IYGSCIPSLD ANASLTSSSA APSIYQRVMQ NFPS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A7e-31225509277Probable WRKY transcription factor 4
2lex_A7e-31225509277Probable WRKY transcription factor 4
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1413419PKRRKKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.008G054100.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150370.0AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007139725.10.0hypothetical protein PHAVU_008G054100g
TrEMBLV7B1N40.0V7B1N4_PHAVU; Uncharacterized protein
STRINGXP_007139725.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83493445
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56270.14e-79WRKY DNA-binding protein 2