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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G043000.1 |
Common Name | PHAVU_008G043000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 540aa MW: 58836.8 Da PI: 7.8544 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G043000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 94.8 | 6.1e-30 | 190 | 249 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
++Dg++WrKYGqK kg+++pr+YYrCt a +Cpv+k+v+r++ed +++++tYeg+Hnh+
Phvul.008G043000.1 190 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVApTCPVRKQVQRCSEDLSILITTYEGTHNHK 249
58***************************99****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0006952 | Biological Process | defense response |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 540 aa
Download sequence Send
to blast |
MSSPGSPKIE EKIITKEDKV KSAKTEMGEV KEENERLKKT LERVEKDYHS LQLRFFDILH 60 KDVSKKGVVD SSTSHEDQSE EPEFVSLCLG RTPTEPKKEA IIGNSNKPTE KEVGPNLTLG 120 LDSKHLLEME VVSDLSPMNS SEEPKETQTE GTLSTNQSAK VINVNTDISD QMPAKRARVS 180 VRARCDTPTM NDGCQWRKYG QKIAKGNPCP RAYYRCTVAP TCPVRKQVQR CSEDLSILIT 240 TYEGTHNHKL PVSATAMAST TSAAASMLLS GSSTSHLPSH ISASFGNAPT TLLNGLSFSD 300 QFHESRAKQI FSPPNHASSH TFSTITLDLT SSAPSSSSTQ FHHGLPSTMA SISNPRSSAS 360 LSFCSPEHNF IPSIWGKGFH DNGTTTTPVD RVPTRPIMQP NNFLQHFYQQ RITSQTPSRE 420 ALAETITKAI STDPSFRSVI AAAVSSIVEH GSNSGKQEVS EDILGSGLNL KLGEHHQSAS 480 PNPLNQNGKG CLTGYFKSLS SKSSESGNVL LLQPPLPFSF SKSVTNQINR YVPEMNTHH*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |