 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.008G041500.1 |
Common Name | PHAVU_008G041500g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
MYB |
Protein Properties |
Length: 325aa MW: 35966.2 Da PI: 7.7491 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G041500.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 55.8 | 1e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g+WT+eEd lv +++++G+g+W+t++ + g+ R+ k+c++rw +yl
Phvul.008G041500.1 14 KGPWTPEEDIVLVSYIQEHGPGNWRTVPTKTGLSRCSKSCRLRWTNYL 61
79********************************************97 PP
|
2 | Myb_DNA-binding | 48.9 | 1.5e-15 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg++T++E++ ++++ +lG++ W++Ia++++ Rt++++k++w+++l
Phvul.008G041500.1 67 RGNFTEQEEKMIIHLQDLLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112
89********************.*********.************996 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 325 aa
Download sequence Send
to blast |
MGRPPCCDKE GVKKGPWTPE EDIVLVSYIQ EHGPGNWRTV PTKTGLSRCS KSCRLRWTNY 60 LRPGIKRGNF TEQEEKMIIH LQDLLGNRWA AIASYLPQRT DNDIKNYWNT HLRKKVKKLF 120 QTGNEGSLGE GFSASRQIPR GQWERRLQTD IQMAKRALSE ALSPEKPSCL SGSNSNPSDS 180 SSSFSSTKPS QSLCYASSAE NIARMLKGWM KSPPKSSRTN SSVTQNSFNN LVTAGADTAS 240 SGAEGLSSVE LSENFESLFE FHQSLESSDS DQFSQSFSPE ATVLQDESKP DIGAEIMPFS 300 LLEKWLLDEA ACQDKVGSGN VKFF*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcription factor. {ECO:0000305}. |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | KT031204 | 0.0 | KT031204.1 Glycine max clone HN_CCL_69 MYB/HD-like transcription factor (Glyma18g49360.1) mRNA, partial cds. |