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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.008G039900.1 |
Common Name | PHAVU_008G039900g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 519aa MW: 56688.1 Da PI: 7.4977 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.008G039900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 104.2 | 7.1e-33 | 224 | 281 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDg+nWrKYGqK+vkgse+prsYY+Ct+ +C vkkkver+ d++++ei+Y+g+Hnhek
Phvul.008G039900.1 224 DDGFNWRKYGQKQVKGSEYPRSYYKCTHLNCVVKKKVERAP-DGHITEIIYKGQHNHEK 281
8****************************************.***************85 PP
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2 | WRKY | 107.2 | 7.9e-34 | 404 | 462 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++dpk+v++tYeg+Hnh+
Phvul.008G039900.1 404 LDDGYRWRKYGQKVVKGNPHPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHD 462
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009723 | Biological Process | response to ethylene |
GO:0009751 | Biological Process | response to salicylic acid |
GO:0009753 | Biological Process | response to jasmonic acid |
GO:1900150 | Biological Process | regulation of defense response to fungus |
GO:1900425 | Biological Process | negative regulation of defense response to bacterium |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 519 aa
Download sequence Send
to blast |
MSTPNAHSDT APHPRPTITL PPRPSAEAFF SAAGGASPGP MTLVSSFFGS DAAADCRSFS 60 QLLAGAMASP MAFSAAVADN SGKDDDGPHK GFKQSRPMNL VIARSPVFTV PPGLSPSGFL 120 NSPGFFSPQS PFGMSHQQAL AQVTAQAVLA QSHMHMQADY QMHAVTAPTE PPLQQPSFAV 180 NEASEQQIVS SVPETKNSQM ETSDISQVDK KYQLVSQAID KPADDGFNWR KYGQKQVKGS 240 EYPRSYYKCT HLNCVVKKKV ERAPDGHITE IIYKGQHNHE KPQANRRVKD NSDSNGSAIV 300 QPKSESNSQG WVGQQVNKFS ENIPDCSVPE SDQTSNQGAP RQLLPGSTES EEVGDVDNRE 360 EADDIEPNPK RRNTDLAVSE VPLSQKTVTE PKIIVQTRSE VDLLDDGYRW RKYGQKVVKG 420 NPHPRSYYKC TSAGCNVRKH VERASTDPKA VITTYEGKHN HDVPAARNSS HNTANTNSVP 480 LKPSVVPPEK HPLLKDMDFG NNDRRPVHLR LKEEQIIV*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that binds specifically to the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Has a positive role in resistance to necrotrophic pathogens (e.g. Botrytis cinerea), but a negative effect on plant resistance to biotrophic pathogens (e.g. Pseudomonas syringae). {ECO:0000269|PubMed:18570649, ECO:0000269|PubMed:22219184}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By biotic and abiotic stresses such as pathogen infection (e.g. Botrytis cinerea and Pseudomonas syringae), salicylic acid (SA), jasmonic acid (JA), ethylene (ACC), liquid infiltration or spraying, and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756, ECO:0000269|PubMed:18570649}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU375355 | 0.0 | EU375355.1 Glycine max transcription factor (WRKY4) mRNA, complete cds. |