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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.007G260900.1 |
Common Name | PHAVU_007G260900g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
HD-ZIP |
Protein Properties |
Length: 328aa MW: 36312.9 Da PI: 8.0371 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.007G260900.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 54.4 | 2.1e-17 | 157 | 211 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
rk+ +++keq Lee F+++ +++ +++ LAk+l+L rqV vWFqNrRa+ k
Phvul.007G260900.1 157 RKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLLPRQVEVWFQNRRARTK 211
778899***********************************************98 PP
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2 | HD-ZIP_I/II | 125.2 | 2.9e-40 | 157 | 247 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91
+kk+rlskeq+++LEesF+e+++L+p++K +la++L+l prqv+vWFqnrRARtk+kq+E+d+e+Lkr++++l+een+rL+ke +eLr +l
Phvul.007G260900.1 157 RKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELR-AL 246
69*************************************************************************************9.55 PP
HD-ZIP_I/II 92 k 92
k
Phvul.007G260900.1 247 K 247
5 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 328 aa
Download sequence Send
to blast |
MELALSLGDT SKSFAFLDKP VNLPSKDPPG FCIAPGKAFE DKRTDAEKRG SSDPPVQLDL 60 LPFTPVLRSQ PPSQLRIPWL TEPCGAARVL DVNLFPSAAE DGDDGTSLSS PSSAVSPFQM 120 DFSIRNGNAE FGGRNKREQQ EGEGTRVSDD EENGSTRKKL RLSKEQSAFL EESFKEHTTL 180 NPKQKLALAK QLNLLPRQVE VWFQNRRART KLKQTEVDCE YLKRCCETLT EENRRLQKEL 240 QELRALKTSQ PFYMQLPATT LTMCPSCERV ATNSTTTNQT SSTINNTASQ IPVELSLSKP 300 RILPFPNGQA QATQAQAQTQ AHRIASS*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 155 | 161 | TRKKLRL |
2 | 205 | 213 | RRARTKLKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 1e-134 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |