PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G257700.1
Common NamePHAVU_007G257700g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 531aa    MW: 59561.8 Da    PI: 7.6746
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G257700.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.91.4e-10255290540
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                         k  rr+++NReAAr+sR+RKka++++Le    +L +
  Phvul.007G257700.1 255 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLNQ 290
                         7789***********************975444444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.6E-7246298No hitNo description
SMARTSM003383.2E-7251317IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.243253297IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-7255297No hitNo description
PfamPF001709.5E-8255293IPR004827Basic-leucine zipper domain
CDDcd147085.80E-24255307No hitNo description
PROSITE patternPS000360258273IPR004827Basic-leucine zipper domain
PfamPF141446.8E-30347419IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MREKGVKRRE KRSYSSRIHN RLLLSLLGNG FKRHKEKAVS PLMGFSIAIE LEAAQEQEQE  60
QETKFLSSSL NIMASSSVKS TNSTTQLEPL PQHLHHQQPP HHFHHHQIPD QEISFGMMPS  120
SSSHSIPANY LSKDSGAYDL GELDQAFFLY LDDPSSVQDQ RQNSSSGMRP PPTLNIFPSQ  180
PMHAVPPSNS KVTMELPSTQ TSGSKRPPGS SIAKPNPHTE APSAPEPPKV VKREGNRKGA  240
TSSSEQEAPK TPDPKTLRRL AQNREAARKS RLRKKAYVQQ LESSRIKLNQ LEQELQRARA  300
QGILMGGNAL LGGEQGFPMA MNGISSEAAM FDVEYARWLE EHQRIVCELR GAVQEHLHEN  360
ELRLYVDNCL AHYDQVMNLK TIVAKTDVFH LVFGMWKTPA ERCFMWIGGF RPSELIKIIL  420
GQIEPLTEQQ ILGICGLQQS TQEAEEALSQ GLDALNQSLS DTITSDSLWC PPNMTNYMGQ  480
MAVAMNKLST LESFARQVRI FCGNFLKECM YESSLHKITT NECMLNMWLM *
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G257700.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-145AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145659.10.0hypothetical protein PHAVU_007G257700g
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLV7BKV80.0V7BKV8_PHAVU; Uncharacterized protein
STRINGXP_007145659.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47313455
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-158bZIP family protein