PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G256800.1
Common NamePHAVU_007G256800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 345aa    MW: 37667.9 Da    PI: 6.0612
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G256800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.94.2e-09187234455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +h+ +Er RR++iN ++  L+el+P +    +k    a +L k +++++sLq
  Phvul.007G256800.1 187 SHSLAERARREKINARMKLLQELVPGC----NKISGTALVLDKIINHVQSLQ 234
                         8*************************9....899999*************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474599.95E-15181252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.81E-9181238No hitNo description
PROSITE profilePS5088814.462183233IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.9E-14184247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.3E-6187234IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.2E-8189239IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    Send to blast
MEQTTLEAIQ FNEEIQGIIA PAPETASSFT ALLELPPTQA VELLHSPDRA GKPPRHNPKP  60
YPLTSFASAS AANLTFPSNA ALIERAARFS IFAGENSNSN SNSNSPEVKR ELPETDSNPS  120
STQGGGSASD PTLENKDEKG LKRKEREKKV KASSKKSKSV VADESSGDGE KLPYVHVRVR  180
RGQATDSHSL AERARREKIN ARMKLLQELV PGCNKISGTA LVLDKIINHV QSLQHEVEIL  240
SMKLAAVNPV IDFNLDSLLA TEGVSPMDCN FPPTVAPAVW PEIPQNANRQ QYQQPWQFDA  300
FHHQAIWGRE EDNTNFMTPE NSLLSYDSSA NSGANELGNH TRNN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G256800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150411e-174AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145650.10.0hypothetical protein PHAVU_007G256800g
SwissprotQ8VZ022e-81BH048_ARATH; Transcription factor bHLH48
TrEMBLV7BIA70.0V7BIA7_PHAVU; Uncharacterized protein
STRINGXP_007145649.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49852945
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57800.22e-82bHLH family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Li Y,Wang H,Li X,Liang G,Yu D
    Two DELLA-interacting proteins bHLH48 and bHLH60 regulate flowering under long-day conditions in Arabidopsis thaliana.
    J. Exp. Bot., 2017. 68(11): p. 2757-2767
    [PMID:28591805]