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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.007G209000.1 |
Common Name | PHAVU_007G209000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 463aa MW: 50885.9 Da PI: 7.1829 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.007G209000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 93.2 | 1.9e-29 | 239 | 296 | 3 | 59 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
Dg++WrKYGqK kg+++pr+YYrCt+a gCpv+k+v+r++ed +v+++tYeg+Hnh+
Phvul.007G209000.1 239 DGCQWRKYGQKISKGNPCPRAYYRCTMAvGCPVRKQVQRCTEDMSVLITTYEGNHNHP 296
9********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 463 aa
Download sequence Send
to blast |
MENHHQMQQH RHQFMNLDPT TVNTGQHHDP SVKELDFFSS TSPSKNTHTD NSNTHSNIPK 60 ENGSQPLFTD QFINTTLNLM CPSQTDELSR STPTDQDPKS PPLNTLEKEF LRLQEENYKL 120 KTMLDQITKN YHHLQFFLAM QKQKPYQNGE KNDNMSGQHL LDPLSCTKLD ANVAASVSDD 180 KSGQEAHHDR VEDVVEQSSS QSLGSSKCPK FEESKPSETP FRRARVSVRA RSEAPVICDG 240 CQWRKYGQKI SKGNPCPRAY YRCTMAVGCP VRKQVQRCTE DMSVLITTYE GNHNHPLPPS 300 ATVMANSTSA AAAMLLSSSS GSIASNEALN NSVGVFSSMP YIPMPTFSAS APFPTITLDM 360 TTNPTQLHRD TSLPLLATTF PHLLGHPIFF PHKIQHSLGQ RQPSFMTDVM TAAVASNPNF 420 TVALAAAISS ILGASRGNDG NNNNSNGRNV LALGTSMLPE ST*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 1e-103 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |