PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G208500.1
Common NamePHAVU_007G208500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 325aa    MW: 35119.9 Da    PI: 8.1611
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G208500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.92.5e-15171216454
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          hn  Er+RRd+iN+++  L+el+P++      K +Ka++L  A+eY+k L
  Phvul.007G208500.1 171 VHNLCERKRRDKINKRIRILKELIPNC-----NKTDKASMLDDAIEYLKTL 216
                         6*************************8.....6****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.104.2E-18164224IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.00E-16165221No hitNo description
SuperFamilySSF474596.15E-19166226IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.288167216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.0E-13171216IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-15173222IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MDFPVQMDSA LDNLQPSSYQ SSEFAKAASS TKGPDEHSSV INSSYGSKGS QNLLISDASN  60
LVPDEQSPAV GHNSALSILG SWGNHRNQTS ISVGLEAKGK ADTKYSDGAL LESSSLCSLA  120
ASNNRNVCSR KHDGIDYSKH LSDNGKEAED VVKEKPAREG TGVKRSRNSE VHNLCERKRR  180
DKINKRIRIL KELIPNCNKT DKASMLDDAI EYLKTLKLQL EIMSMGGGFC MPLMMLPNAS  240
HLMIKAPHLH QLMGVGMGLR PGTTIPMTPL PAITDNRAQM FHFPNQVPTM HPSHAPFIPM  300
VGNPCTQTPL ATGTATNMAE NLPS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175180ERKRRD
2176181RKRRDK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G208500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007145086.10.0hypothetical protein PHAVU_007G208500g
TrEMBLV7BHT40.0V7BHT4_PHAVU; Uncharacterized protein
STRINGXP_007145086.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF133291829
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.26e-27phytochrome interacting factor 3