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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.007G166100.1 |
Common Name | PHAVU_007G166100g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
CO-like |
Protein Properties |
Length: 342aa MW: 38789.4 Da PI: 6.9881 |
Description |
CO-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.007G166100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-B_box | 19.3 | 2.3e-06 | 8 | 40 | 2 | 34 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeH 34
++r+C+ +++ ++ l+C+ ++ lC C ++H
Phvul.007G166100.1 8 KQRTCDYCGDFKALLYCRADSAKLCFLCDRKIH 40
789*******88********************9 PP
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2 | CCT | 64.8 | 2.5e-22 | 295 | 338 | 1 | 44 |
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44
R+ allRY+eK+ktR+++K+irYesRK++AesR RvKGrFvk +
Phvul.007G166100.1 295 RDSALLRYREKKKTRRYDKHIRYESRKVRAESRMRVKGRFVKDE 338
899**************************************975 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 342 aa
Download sequence Send
to blast |
MSAYPNQKQR TCDYCGDFKA LLYCRADSAK LCFLCDRKIH FPNQLFSKHS RTHLCDGCGD 60 SPASVLCYAE NSVFCHNCDC QSHNNRMLSQ EHQRRPLEGF SGCPSVTQML MILGLPEKSL 120 LSTEGESSHD DGLSELHVWN SPSVFGFEDL IASSSYKNHK GACGRQKEEI LSQLRELIKL 180 EPDLTHGEVD AEPQLQFENL STGFERDIEA NMFPSYEAGV FCWHGESSDR ANQIVPSDTS 240 VSDYSELASA KDPTFTIPAT HTYCNNQGKP SNYLKAENLS PTPKATPYEL TSHERDSALL 300 RYREKKKTRR YDKHIRYESR KVRAESRMRV KGRFVKDETQ K*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 2e-44 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |
GenBank | AP015038 | 2e-44 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |
GenBank | AP015039 | 2e-44 | AP015039.1 Vigna angularis var. angularis DNA, chromosome 6, almost complete sequence, cultivar: Shumari. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G47890.1 | 9e-72 | B-box type zinc finger protein with CCT domain |