PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G156200.1
Common NamePHAVU_007G156200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 518aa    MW: 57078.7 Da    PI: 6.7409
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G156200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH50.44.1e-16298344455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          hn  ErrRRdriN+++  L+el+P +      K +Ka++L +A+eY+ksLq
  Phvul.007G156200.1 298 VHNLSERRRRDRINEKMKALQELIPRC-----NKSDKASMLDEAIEYLKSLQ 344
                         6*************************8.....6******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088818.146294343IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.1E-20297372IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000835.82E-17297348No hitNo description
PfamPF000101.2E-13298344IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.8E-21298352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.9E-18300349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 518 aa     Download sequence    Send to blast
MNHCVPDFEI QMEDDEEFPI PVSKKPSMQN DEIMELLWQN GQVVMHSQNH RPLRKPPHTL  60
PSGGGDGVIP AREIRSSEHE NYGNQHLFMQ EDEMASWLHY PIHEDPPPFD HHDFCADMLN  120
PPTNAIASQS HNSAAIQSSI RTTELRHPAP RPPIPPSRLP VPAAKRMQNF AHFSKQGNAS  180
SSSKAAAAQP TMVDSCDTPV ATAELGETGR ASVTAADAGK AAESGGREAA TCDLTVTSSP  240
GGSSGSAEPV QKEVDRKRKG REAEESEFQS EDVDFESPEA KKHGRGSTST KRSRAAEVHN  300
LSERRRRDRI NEKMKALQEL IPRCNKSDKA SMLDEAIEYL KSLQLQVQMM SMGCGMVPMM  360
FPGIQQYMPP MGMGIGMGMG MEMGMNRPVM PFPNMLTSST LPAATAAAHL GPRFPMPPFH  420
MPHVPAPDSS RMKAPNQSDN NMLNALGTQG PDQSHIPNFT DPYQQYVGLQ QVQLQLMQVK  480
LSLMLCLFSR FFFFRRGGGF KLPEGHHIPA TVTYHLL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1302307ERRRRD
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G156200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007144439.10.0hypothetical protein PHAVU_007G156200g
TrEMBLV7BHS80.0V7BHS8_PHAVU; Uncharacterized protein
STRINGXP_007144439.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF46073351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.32e-57phytochrome interacting factor 3-like 5