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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.007G140500.1 |
Common Name | PHAVU_007G140500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 589aa MW: 64865.2 Da PI: 4.3673 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.007G140500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 163.1 | 1e-50 | 6 | 131 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
pGfrFhPtdeelvv+yLk+k++g+ + ++i+ vd+yk+ePwdLp +k+k+++ ewyfFs d+ky +g+r+nrat++gyWk+tgkd++
Phvul.007G140500.1 6 PGFRFHPTDEELVVFYLKRKITGNLSRY-DHIAVVDVYKLEPWDLPpmSKLKTKDLEWYFFSVLDRKYGNGSRTNRATEKGYWKTTGKDRP 95
8***********************9888.89**************96458888888*********************************** PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
v + +++ vg+kktLv++ grap+g++t+Wvmhey++
Phvul.007G140500.1 96 VAH-GDRIVGMKKTLVYHIGRAPHGRRTNWVMHEYKM 131
***.999****************************86 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009644 | Biological Process | response to high light intensity |
GO:0009962 | Biological Process | regulation of flavonoid biosynthetic process |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0005737 | Cellular Component | cytoplasm |
GO:0016021 | Cellular Component | integral component of membrane |
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 589 aa
Download sequence Send
to blast |
MAPIGPGFRF HPTDEELVVF YLKRKITGNL SRYDHIAVVD VYKLEPWDLP PMSKLKTKDL 60 EWYFFSVLDR KYGNGSRTNR ATEKGYWKTT GKDRPVAHGD RIVGMKKTLV YHIGRAPHGR 120 RTNWVMHEYK MLDEELTRAG TVLDVYVVCR IFEKSGSGPK NGAKYGAPLD EKEWDAEDEN 180 EQKKVVPLPE TAHHVVAPLT ETPHNVVSPP LPVAAAVAPP LVADDEFWNI GAFLETNDLD 240 MELDLTDMIG NATFPSSNFH HGECSTHAEN SQELIKDQEP LEGTFGISRL ENGQPLDMAE 300 QQDMGTSSVR DGDDGELSEI ENLLNFNYAS DNMDLDLYFD ATQDLPAADD GSFLETNDLA 360 IGNEGNPTEA DPSANDMLDE YLALPDDDIC NYISFDLPQI PESENSDSNQ GSPLTQQTLE 420 GETADKAVVS KHDSDAQTSK EAFSVQNREE EKLAPENSNP FVKEAYGWLA SIPAAPAHAF 480 EFPAKDITLG IHSAAQSSHT AHITTGMISI TDITFRGNAM DWPMGKSGGF NTAISTEFSQ 540 PDVNCAALIP LSGKTAFVLS HGWIFLTGFS VLILSLSFKI GSMMYTGK*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 8e-46 | 6 | 160 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 8e-46 | 6 | 160 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 8e-46 | 6 | 160 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 8e-46 | 6 | 160 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 9e-46 | 6 | 160 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 8e-46 | 6 | 160 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 8e-46 | 6 | 160 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015041 | 1e-160 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |