 |
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.007G092000.1 |
Common Name | PHAVU_007G092000g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
LBD |
Protein Properties |
Length: 219aa MW: 23662.3 Da PI: 6.484 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.007G092000.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 136.5 | 9.8e-43 | 65 | 164 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlk 91
+CaaCk+lrr+C+++Cvlapyfp ++p kf ++h++FGasn++k+l++lpe++r da+ss+vyeA+ar+rdPvyG++g i +lq+q+++l+
Phvul.007G092000.1 65 PCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQ 155
7****************************************************************************************** PP
DUF260 92 aelallkee 100
a+la++++e
Phvul.007G092000.1 156 AQLAKAQAE 164
*****9987 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 219 aa
Download sequence Send
to blast |
MDYKLNTTTP SPPIPIPIHV PSMLSNSPPS SSSSPPSHSP TPFPSPSPSP SAAPPSPPPP 60 VVVSPCAACK ILRRRCVEKC VLAPYFPPTD PLKFTIAHRV FGASNIIKFL QELPESQRAD 120 AVSSMVYEAN ARIRDPVYGC AGAICQLQKQ VSELQAQLAK AQAELVNMQC QQANLVALIC 180 MEMSQSQEQH VVQPQPLVDM SCFIEDNTFG TAWEPLWT*
|