PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Phvul.007G081000.1 | ||||||||
Common Name | PHAVU_007G081000g | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family | bZIP | ||||||||
Protein Properties | Length: 241aa MW: 26920.5 Da PI: 6.1394 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.3 | 3.9e-14 | 158 | 215 | 3 | 60 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 + +r+rr++kNRe+A rsR+RK+a++ eLe + +Le+eN++L ke e kke +k Phvul.007G081000.1 158 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVKLEEENDKLLKEKAERKKERYKQL 215 679**************************************98776655555555433 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-11 | 154 | 216 | No hit | No description |
SMART | SM00338 | 1.0E-8 | 156 | 218 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 8.9E-13 | 158 | 217 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.864 | 158 | 210 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.46E-8 | 160 | 211 | No hit | No description |
CDD | cd14707 | 8.16E-17 | 160 | 206 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 163 | 178 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence Send to blast |
MASSKLMASS HSRKSESSSP SPTPQFTTTN FIPISDAAVT AAPKTVDDVW REIVAGDRRE 60 CKEEAPDDEM MTLEDFLAKA GAVNDDDNEE VDCDIKMPMP LTERLGSGVF AFDPLLAATP 120 FQDGVEGSVI GFGNGLEVVE GGRGKRARPV LEQLDKAAQQ RQRRMIKNRE SAARSRERKQ 180 AYQVELESLA VKLEEENDKL LKEKAERKKE RYKQLMEKVL PIAQKQRPPC TLRRARSLQW 240 * |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Phvul.007G081000.1 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015041 | 0.0 | AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007143550.1 | 1e-176 | hypothetical protein PHAVU_007G081000g | ||||
Swissprot | P42777 | 5e-58 | GBF4_ARATH; G-box-binding factor 4 | ||||
TrEMBL | V7BCH8 | 1e-175 | V7BCH8_PHAVU; Uncharacterized protein | ||||
STRING | XP_007143550.1 | 1e-176 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2028 | 34 | 81 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44080.1 | 7e-54 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Phvul.007G081000.1 |
Entrez Gene | 18625239 |