PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G079800.1
Common NamePHAVU_007G079800g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family Trihelix
Protein Properties Length: 636aa    MW: 71489.7 Da    PI: 5.6279
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G079800.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix92.83.6e-2959142186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         rW++qe+laL+++r++m+  +r+++lk+plWeev++k++e g++rs+k+Ckek+en+ k++k++ke++++++  + +++++fdql+
  Phvul.007G079800.1  59 RWPRQETLALLKIRSDMDAVFRDSSLKGPLWEEVARKLAELGYHRSSKKCKEKFENVYKYHKRTKESRSGKQ--EGKHYKFFDQLQ 142
                         8********************************************************************964..5557******98 PP
2trihelix102.92.5e-32445530187
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                         rW+k ev+aLi++r+++e++++++  k+plWe++s+ m + g++rs+k+Ckekwen+nk++kk+ke++k r  e+s+tcpyf++l+a
  Phvul.007G079800.1 445 RWPKAEVHALIRLRTSLETKYQENGPKAPLWEDISAGMLRIGYNRSAKRCKEKWENINKYFKKVKESNKHR-RENSKTCPYFNELDA 530
                         8********************************************************************87.78889*******985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.0156118IPR001005SANT/Myb domain
PROSITE profilePS500907.1258116IPR017877Myb-like domain
CDDcd122031.16E-2358123No hitNo description
PfamPF138375.8E-2058144No hitNo description
PROSITE profilePS500907.178438502IPR017877Myb-like domain
SMARTSM007170.055442504IPR001005SANT/Myb domain
CDDcd122031.80E-26444509No hitNo description
PfamPF138373.2E-22444531No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 636 aa     Download sequence    Send to blast
MQLGDTTAME TSSGEAVAAH DGGEVIMMDA TSGEEKGKEG GLEEEEEGDK INNSCAGNRW  60
PRQETLALLK IRSDMDAVFR DSSLKGPLWE EVARKLAELG YHRSSKKCKE KFENVYKYHK  120
RTKESRSGKQ EGKHYKFFDQ LQALENQFIV SYPLTPQPTL ATTNTVALLP PPTKPSDTTT  180
ISYVTTTVPS TNPTAISLLS PPPPPPPPTN ATTTTTITSP TVLTNPSNPP QPNNNNHNIP  240
YSLPNMNNLF STTSTSSSTA SDEDLEEKYR KKRKWKDYFR RLTRQVLAKQ EEMQKRFLEA  300
IDKREREHVA QQDAWRIQEM ARINREHELL VQERSTAAAK NAAVIAFLQQ LSGQNQNPST  360
QAGANFLQPP PSQPPPTPQV SQVKPPPQHA PQPQTPMVMA NINNIEIQKM SNGHSAVAAT  420
PTTAATAICV VSTTPTSLNS LSSSRWPKAE VHALIRLRTS LETKYQENGP KAPLWEDISA  480
GMLRIGYNRS AKRCKEKWEN INKYFKKVKE SNKHRRENSK TCPYFNELDA IYKEKSKTQN  540
PFGASFLNMK PHELMEPLMV QPEQQWRPPS QYEEGAVKEN SESEYERKER EEEEEEDDEE  600
VEEDENEEGD LESVEDEGGS RYEIATNKLS SVDAV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G079800.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150410.0AP015041.1 Vigna angularis var. angularis DNA, chromosome 8, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007143537.10.0hypothetical protein PHAVU_007G079800g
TrEMBLV7BGC20.0V7BGC2_PHAVU; Uncharacterized protein
STRINGXP_007143537.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.13e-48Trihelix family protein