PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.007G041200.1
Common NamePHAVU_007G041200g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 279aa    MW: 30474.8 Da    PI: 8.3857
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.007G041200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.40.000581632001254
                         HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                         R +++ ++++ L++l+ +      +K + a++L +A+ YI+ L
  Phvul.007G041200.1 163 RKEKLGERIAALQQLVSPF-----GKTDTASVLHEAMGYIRFL 200
                         77788899********998.....8****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.88E-5143205No hitNo description
PROSITE profilePS5088810.906151200IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.0E-7162207IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.7E-10162213IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    Send to blast
MEPKDEFELH HFTAPTGTTF SQLLFGDDHD HHHHHDHHDA TALPLPQDHS SYNHNNLSRS  60
PLFSFHKPPK MLCFGNHQNQ PHLSLPPTTV TPQKSVITSS DSSSASSSNY TNTGFNSLPK  120
STSLQKKRNG LGQEPVTKVG VGGQRQTKKT KAENPTSTGH AKRKEKLGER IAALQQLVSP  180
FGKTDTASVL HEAMGYIRFL HDQVQVLCSP YLQTLSSSDQ HQHGDGENNE EEVKKELRSR  240
GLCLIPVGCT VHVASSNGAD FWSPGAIGKK VSPSSSKQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.007G041200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007143069.10.0hypothetical protein PHAVU_007G041200g
TrEMBLV7BDR60.0V7BDR6_PHAVU; Uncharacterized protein
STRINGXP_007143069.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF103212129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.12e-50bHLH family protein