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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.006G195500.1 |
Common Name | PHAVU_006G195500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
bHLH |
Protein Properties |
Length: 214aa MW: 24680.1 Da PI: 4.6486 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G195500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 30 | 9.2e-10 | 46 | 91 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ e ErrRR+++ s++ Lr ++P + ++Ka+i e A+ YI +Lq
Phvul.006G195500.1 46 NLETERRRREKLSSRLLMLRAIVPII-----TNMNKATIIEDAITYIEKLQ 91
5689*********************6.....58*****************9 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0048658 | Biological Process | anther wall tapetum development |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
Protein Sequence Length: 214 aa
Download sequence Send
to blast |
MEYEDEDWLC VTMEEFSLAT ENGCTKQGIG RKRNYDDDTR EFKSKNLETE RRRREKLSSR 60 LLMLRAIVPI ITNMNKATII EDAITYIEKL QDKVQSLSQE LHQMEATSEE TAEAKIDEID 120 AAQDMKNLGI QEEVRVAQID GNKLWVKIII EKKRGRFRKL MEALNNFSIE LIDTNLTTTK 180 GAFLITSCIQ DRDGEKLEIQ QTKDLLQDII NGM*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 49 | 54 | ERRRRE |
2 | 50 | 55 | RRRREK |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 3e-85 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |