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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.006G181500.2 |
Common Name | PHAVU_006G181500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 314aa MW: 35314.7 Da PI: 7.3848 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G181500.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 109.2 | 4.9e-34 | 63 | 204 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.......vikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk.... 79
lp+G++F+P+d+e++ e+L++kv+++ ++l+ +++ +i++++P++Lp v+++ + +fF++ +k+y+tg+rk+r+++
Phvul.006G181500.2 63 LPAGVKFDPNDQEIL-EHLEAKVASDACKLHPlidefipTLEGEnGICSTHPEKLP-GVSKDGQIRHFFHRPSKAYTTGTRKRRKVHtdee 151
799***********9.99********95553333333222333336**********.555666777******************7444465 PP
NAM 80 ..sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
+ +W++tgk+++v++++g+++g kk+Lv+y gr++k+ekt+Wvmh+y+l
Phvul.006G181500.2 152 gsETRWHKTGKTRAVFAAGGAVKGFKKILVLYtnYGRKKKPEKTNWVMHQYHL 204
55778***************************6658***************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MTWCNDPDEE RRIESITPTM IISQKTDVSD IKLSEEIRTV TCPSCGHTIE FKDQGGIHEL 60 PGLPAGVKFD PNDQEILEHL EAKVASDACK LHPLIDEFIP TLEGENGICS THPEKLPGVS 120 KDGQIRHFFH RPSKAYTTGT RKRRKVHTDE EGSETRWHKT GKTRAVFAAG GAVKGFKKIL 180 VLYTNYGRKK KPEKTNWVMH QYHLGSTEEE KDGELVVSKI FYQTQPRQCG NNPIITEEPY 240 QKMMNINDGS GHNNNTSTPK TATLVDRYNA PYINYGNEHL SYNNLVVEAD GSYIRYAMDA 300 KKARVESNSG KSF*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that plays a regulatory role in the development of secondary cell wall fibers (PubMed:18952777,PubMed:22133261). Involved in the regulation of cellulose and hemicellulose biosynthetic genes as well as of genes involved in lignin polymerization and signaling (PubMed:22133261). Is not a direct target of SND1 (PubMed:18952777). {ECO:0000269|PubMed:18952777, ECO:0000269|PubMed:22133261}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KT031220 | 0.0 | KT031220.1 Glycine max clone HN_CCL_58 NAC transcription factor (Glyma15g08480.4) mRNA, partial cds. |