|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.006G179700.1 |
Common Name | PHAVU_006G179700g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
ERF |
Protein Properties |
Length: 264aa MW: 29608.1 Da PI: 5.1603 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G179700.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.3 | 1.3e-20 | 121 | 171 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrd s+ + +r++lg+f+taeeAa a+++a+++++g
Phvul.006G179700.1 121 HYRGVRRRP-WGKYAAEIRDSSK---KgARVWLGTFDTAEEAALAYDKAALRIRG 171
8********.**********543...34*************************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 264 aa
Download sequence Send
to blast |
MDNHSNHVAT SEGILENVWA KIMSSDKADG RKGDAAESSN SWEELPNLDG REGSMEILQR 60 LPSLGRWISM GADFWEEVLD GIALPNTSNT EYSSNNNMES GGECDSKVED AVRIEKEVTK 120 HYRGVRRRPW GKYAAEIRDS SKKGARVWLG TFDTAEEAAL AYDKAALRIR GPKAYLNFPL 180 ERVAKALGCD SKGTHLTCRS IGNREKMINS RRRGSREREV FDDDMMNEEP ARKKLECMVE 240 NEIGVFVFQD LGKDYLDSLL SSF*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |