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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.006G123000.1 |
Common Name | PHAVU_006G123000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 496aa MW: 53554.8 Da PI: 6.3234 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G123000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 97.6 | 8.4e-31 | 264 | 322 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+
Phvul.006G123000.1 264 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 322
699************************998****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 496 aa
Download sequence Send
to blast |
MCSCIFGPIS MDNYQGDLTD IVRASGGAYG GGSSSSCSTG TSSAELPTTS HHHTIITHNH 60 NLSRNDHWHQ HFSSSSSSSS DPITFSSVLQ DPRGLTNFGD PFSTMRDPFL QELGMPSASA 120 YFTGGLEEAA ASFGAAAVTT NANTSATVFA AHKILEEHDM RRPCKNIFSN MIQISPNAKL 180 PVSPYDSTTP MAPSPRPIKP PAVVSPNMVN ANSSKDCLVD TTGVQISSPR NPGLKRRKNQ 240 AKKVVCIPAP AAANSRQTGE VVPSDLWAWR KYGQKPIKGS PYPRGYYRCS SSKGCSARKQ 300 VERSRTDPNM LVITYTSEHN HPWPTQRNAL AGSTRSQPSK NNAGNSKSSE GSNPQKSTTA 360 KAKDDQQQES NTSEGNVSPV VAGNSSANSA SVKEENMEDI EKQFEMDEGE FSDGLPYKPC 420 LMDQSNNQSE DFFAELGEIE ADPLDLLFTQ GFGAAGDQRE ESKALDPFHL FDWSGDNNTN 480 TNTSSFEEPN TKRRS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |