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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.006G120800.1 |
Common Name | PHAVU_006G120800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
MYB |
Protein Properties |
Length: 330aa MW: 37237.2 Da PI: 6.5226 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G120800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 56 | 9e-18 | 25 | 72 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT +Ed+ l+++++ +G g+W++ ar g++Rt+k+c++rw++yl
Phvul.006G120800.1 25 RGPWTVDEDLALINYIANHGEGRWNSLARSAGLKRTGKSCRLRWLNYL 72
89********************************************97 PP
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2 | Myb_DNA-binding | 48.5 | 2e-15 | 78 | 121 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+ T eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
Phvul.006G120800.1 78 RGNITLEEQLLILELHGRWGNR-WSKIAQYLP-GRTDNEIKNYWRT 121
7999******************.*********.***********96 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MEVKGRVSNS TGTIVQSEDE IDLRRGPWTV DEDLALINYI ANHGEGRWNS LARSAGLKRT 60 GKSCRLRWLN YLRPDVRRGN ITLEEQLLIL ELHGRWGNRW SKIAQYLPGR TDNEIKNYWR 120 TRVQKHAKQL KCDVNSKQFK DAMRYLWMPR LVERIQAAAA TATAGSPTAS ASATTTITNN 180 NNTTYNYNNN LNNSFEVHSG NMMLSPAIMN NNFGGSQSYT PENSSTGASS DSFGTQVSPV 240 SELTQDYYNN VTVVNSNNNN NPNPDYYPQV QDQLSFLDCI TSPSGLFSQQ LDFQSMEPNT 300 PWIQSNGDTY NGFWNVENML LFQQLTDNM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015038 | 0.0 | AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari. |