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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.006G047300.1 |
Common Name | PHAVU_006G047300g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 445aa MW: 48541.9 Da PI: 7.9333 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.006G047300.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 96 | 2.6e-30 | 226 | 283 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnh 58
+Dg++WrKYGqK+ kg+++pr+YYrC++ gCpv+k+v+rsaed++v+++tYeg+Hnh
Phvul.006G047300.1 226 SDGCQWRKYGQKMAKGNPCPRAYYRCSMGtGCPVRKQVQRSAEDQSVLITTYEGQHNH 283
7***************************98**************************** PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 445 aa
Download sequence Send
to blast |
MEEATSNDDS NIAPVTHSSL VFDGKRLVLD EMDFFAQKKK KKKKNVVPDD EMVHQMELHV 60 DTRLDLLTKS SPTMGEGSSE AKGNKRDDKF AAMVAELHHM NAENQRLRDQ VDQANDKYHA 120 LHNQVMKIME KRQKNEGKKA DMIPRPFLDI GVAMKEESSQ QHPKGKLQES KNQKICTTEL 180 EASEKVIPRV FSNSSFKDVD EASETMSMIK KARVSVRARS VSSMISDGCQ WRKYGQKMAK 240 GNPCPRAYYR CSMGTGCPVR KQVQRSAEDQ SVLITTYEGQ HNHVLPPAAK AMASTTSAAA 300 SMLLSGSMPS SDGLLHPSIL ESATLPFSQN LATLSASAPF PTITLDLTQS ATNTSSQQLP 360 QEAPQDSQLS LISPLLAPNL FNHQTKLSSL HGSQGTEPAS FADTVNAATA AITTDPKFSA 420 ALMAAITSII GSSHPVETQH CNNK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015037 | 0.0 | AP015037.1 Vigna angularis var. angularis DNA, chromosome 4, almost complete sequence, cultivar: Shumari. |