PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.006G021900.1
Common NamePHAVU_006G021900g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 272aa    MW: 30189.6 Da    PI: 7.8284
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.006G021900.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.13.8e-13201244548
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                         +r rrk+kNRe+A rsR+RK+a+  eL  kv  Le+eN +Lkke
  Phvul.006G021900.1 201 RRLRRKIKNRESAARSRARKQAYHNELVGKVSRLEEENVKLKKE 244
                         6889**************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-11196244No hitNo description
SMARTSM003383.1E-13197269IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.772199244IPR004827Basic-leucine zipper domain
PfamPF001703.1E-11201245IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.7E-10201248No hitNo description
CDDcd147078.07E-14201238No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MGIQTMGSQG NGQQSHLQPS SLSRQGSWYN LTLDEVNSQL GDLGKPLGSM NLDELLQNVW  60
TAEASKSSVI GVDSENMSSS SSLQRQASLT LARALSGKTV DEVWREIQQG QKKRYGDEVK  120
TEEGEMTFGE TTLEDFLVQA GLFAEASISP AVGLDTMDFS TAQGFQHKTG LSSSPSIGSL  180
SDTRPGRKRD TPDAFEKTLE RRLRRKIKNR ESAARSRARK QAYHNELVGK VSRLEEENVK  240
LKKEKEFEER LTPDPLPEPK YQLRRHNSAP F*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.006G021900.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150380.0AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007146214.10.0hypothetical protein PHAVU_006G021900g
SwissprotQ9LES35e-63AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLV7BMF20.0V7BMF2_PHAVU; Uncharacterized protein
STRINGXP_007146214.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF124642532
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-45ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]