PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.005G181400.1
Common NamePHAVU_005G181400g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 294aa    MW: 33304.1 Da    PI: 5.4757
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.005G181400.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.68.2e-12117163455
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          h + Er+RR+++  +f  L + +P +     kK++Ka +L++A++Y+k+Lq
  Phvul.005G181400.1 117 DHIMSERKRRQELTRKFIALASTIPGL-----KKMDKAHVLREAMNYVKQLQ 163
                         6999***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.678113162IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.19E-16117182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.5E-15118179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.62E-10118167No hitNo description
PfamPF000102.8E-9118163IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-12119168IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MEENQWGNCS SHMEMEDEVL NECLCQTNPF DEEFLRDILQ QPEAEEGGDD MMMMMKNKNS  60
NSSSMMNLCG EENKKKSGYI LSFEGLTGWK DVSENSNSTT RSNQGTKKTR SASESMDHIM  120
SERKRRQELT RKFIALASTI PGLKKMDKAH VLREAMNYVK QLQERVEVLE EDIQKNNAES  180
AITITRSHLC IDDTNSDECY GSNEAVPPEV EARVLGKQVL IKIHCGKQKG ILLKIMSQLE  240
HLHLYISTSN VLPLGNTIDI TIIAQMGDKY NMVVKDLVKE LRRVAMMKLC VSQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1121126ERKRRQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.005G181400.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007150796.10.0hypothetical protein PHAVU_005G181400g
TrEMBLV7C0G90.0V7C0G9_PHAVU; Uncharacterized protein
STRINGXP_007150796.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15398711
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-48bHLH family protein