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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.005G147500.1 |
Common Name | PHAVU_005G147500g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
MYB |
Protein Properties |
Length: 305aa MW: 34353.4 Da PI: 5.8779 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.005G147500.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 46.4 | 9e-15 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
+g W++eEde+l ++ G g+W+ +ar g+ R++k+c++rw +yl
Phvul.005G147500.1 16 KGLWSPEEDEKLMKYMVNSGQGCWSDVARNAGLQRCGKSCRLRWINYL 63
678*******************************************97 PP
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2 | Myb_DNA-binding | 49 | 1.4e-15 | 69 | 112 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
rg+++++E+el+++ + lG++ W+ Ia++++ gRt++++k++w++
Phvul.005G147500.1 69 RGAFSPQEEELIIHFHSFLGNR-WSQIAARLP-GRTDNEIKNFWNS 112
89********************.*********.***********97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MRKPEGCSGK ENKFRKGLWS PEEDEKLMKY MVNSGQGCWS DVARNAGLQR CGKSCRLRWI 60 NYLRPDLKRG AFSPQEEELI IHFHSFLGNR WSQIAARLPG RTDNEIKNFW NSTIKKRLKN 120 MSSATTGSTS TNASETSSEP CKDPKTGGFV PTQHHQHASY VHVFGSSPSQ SIQTTALNTM 180 IERLPMLDHG LNIGPWFSQS EVEKGCYLEN QVFGSVDIGV EGDMFDPPLE NLNTSINHNL 240 SKKETNSSYF DDLNSILNNC NIGITSENKE GVENLFQQEL ATAEWDFEEL MKDVSSFPFV 300 DFSF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 1e-103 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |