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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.005G145100.1 |
Common Name | PHAVU_005G145100g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
GRAS |
Protein Properties |
Length: 719aa MW: 81081.6 Da PI: 5.6847 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.005G145100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 374.4 | 1.4e-114 | 343 | 715 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPi 90
l++lL+ cA+avs+++++ a++lL+++++++s gd+ qRla+y+++AL+arl++ ++++ + ++ ++++ l+a+++f ++P+
Phvul.005G145100.1 343 LRTLLVLCAQAVSASNNRTANELLKQIRQHSSALGDASQRLAHYVANALEARLVGAGTGTQIFYmSHKK---FTTTDYLKAYQVFISACPF 430
5789***************************************************65555432213333...4599*************** PP
GRAS 91 lkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefn 179
kf+h+ aN++I + +e++e++HiiDf+i +G+QWp L++ L+sR +gpp+lRiTg++ p++g ++++eetg+rLak++++++vpfe++
Phvul.005G145100.1 431 KKFAHFFANKMIIKTAEKAETLHIIDFGILYGFQWPILIKFLSSRVGGPPKLRITGIEYPQPGfrPSDRIEETGRRLAKYCKRFNVPFEYK 521
**************************************************************9**************************** PP
GRAS 180 vlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfds 270
++ ++++e++++e+L+++++E+laVn+ ++ ++lldes +++s++++vL+l+++++P+++v + + ++n++ F++rf eal +ys+++d+
Phvul.005G145100.1 522 AIPSRNWETIQIEDLKIESNEVLAVNCLVRFKNLLDESIEVSSPKNAVLNLIRKMNPHIFVDAVVNGSYNAPFFVTRFKEALFHYSSIYDM 612
*9999************************************************************************************** PP
GRAS 271 leaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
+++ ++re+e+r ++Ere++grei+nvvace er+er et+++W+ r ++aGF+++pl+++ +++ + lr+ + + + +e+ g++++g
Phvul.005G145100.1 613 FDTLISRENEWRLMLEREFFGREIMNVVACEALERVERPETYKQWQVRNTRAGFRQLPLDKELMAKFRGKLREWYHKDFVFDEDGGWMLQG 703
***************************************************************************888************* PP
GRAS 362 WkdrpLvsvSaW 373
Wk+r L++ S+W
Phvul.005G145100.1 704 WKGRILYASSCW 715
************ PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 719 aa
Download sequence Send
to blast |
MDPNTVMSGY DFDEWDLNGH YTDLVTDPFS FQSDVGPPGF FPNTILDSDP LVSSSSASAA 60 VAATVEEDTD FSETFKFISQ ILMEENFEQK PCMCYDPLTL QHTEKSFYDA LELEPPLPLS 120 PNQHPLESPD GNSSNSTTDS ANSHDFKPSS PNTPVSGGGD ALHSSTHAPS FFVPPSALTK 180 INEGTLDLDS SVSKLLAENI FSDAESMLQF RRGLEEASKF LPQRAQLFTG FESTTVSAEP 240 KVGGDLTVKR ENLIGEKSRK NHARQDEEEG RSNKHSEVCV DEENEISEIF DKVLLSVENV 300 PLCVEKNVSV AVGDSNAKLR DQPVDGGKVR SKRQGKKKET VDLRTLLVLC AQAVSASNNR 360 TANELLKQIR QHSSALGDAS QRLAHYVANA LEARLVGAGT GTQIFYMSHK KFTTTDYLKA 420 YQVFISACPF KKFAHFFANK MIIKTAEKAE TLHIIDFGIL YGFQWPILIK FLSSRVGGPP 480 KLRITGIEYP QPGFRPSDRI EETGRRLAKY CKRFNVPFEY KAIPSRNWET IQIEDLKIES 540 NEVLAVNCLV RFKNLLDESI EVSSPKNAVL NLIRKMNPHI FVDAVVNGSY NAPFFVTRFK 600 EALFHYSSIY DMFDTLISRE NEWRLMLERE FFGREIMNVV ACEALERVER PETYKQWQVR 660 NTRAGFRQLP LDKELMAKFR GKLREWYHKD FVFDEDGGWM LQGWKGRILY ASSCWVPA*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |