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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.005G145000.1 |
Common Name | PHAVU_005G145000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
GRAS |
Protein Properties |
Length: 684aa MW: 77454.8 Da PI: 5.2736 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.005G145000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 355.9 | 6.1e-109 | 309 | 680 | 1 | 373 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91
l++lL++cA+av+s++ + a++l++++++++sp+gd+ qRla+yf +AL+a l +++ ++y+ ++++ s ++ ++a++++ v+P+
Phvul.005G145000.1 309 LRTLLIHCAQAVASDSPSFAKQLVKQIKQHSSPTGDTAQRLAHYFGNALEACLDGTGFHVYSVASSKRIS---AKDMIKAYHVYASVCPFE 396
6789***************************************************9999**988888887...99**************** PP
GRAS 92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnv 180
++ + aN+ I+ +e+++++HiiDf+i +G++Wp+L+ +++ Rp+gpp+lR Tg+++p++g +e++ etg+rL++++++++vpfefn+
Phvul.005G145000.1 397 MIAIMFANKSIYSLAENAKTIHIIDFGIRYGFKWPSLISEISRRPGGPPKLRFTGIDQPQPGfrPEERVLETGRRLENYCKRFNVPFEFNA 487
******************************************************************************************* PP
GRAS 181 lvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl 271
+a++++++++e+L+++++E +aVn+++ql+rlldesv l+++rd vL+l+k+ +P+++v++ + +h+ + F+ rf eal +ysa+fd+l
Phvul.005G145000.1 488 -IARKWDTIRIEDLKIEKNEFVAVNCMFQLERLLDESVVLDNPRDGVLRLIKKANPDIFVHSIVNGSHDVPFFVSRFREALFHYSAVFDML 577
.7***************************************************************************************** PP
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlg 361
+++l re+ r + E+el+g+ei+n++aceg er+er +t+++W+ ++ GF+ +pl++k+ ++ k r + + +++e + +++++g
Phvul.005G145000.1 578 DSNLDREDPSRLMFEKELFGQEIMNIIACEGCERVERPQTYKQWQLHNMRIGFRLLPLNQKVIDKLKKRWRDDAyNTNFMLEVDGDWVLQG 668
*******************************************************************99999887999************* PP
GRAS 362 WkdrpLvsvSaW 373
Wk+r L + S+W
Phvul.005G145000.1 669 WKGRILHASSCW 680
************ PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
Protein Sequence Length: 684 aa
Download sequence Send
to blast |
MDRRVSSTMN IANDEEESCF DEGDVSAVLD YIKQMLMEED TEEKYSMFHD SLALQYTERS 60 FYEVITHHNP SSSSSSSAHH HAHSCTSSSE ESSEQNVSGS SSDNSTGSST DNSTSISAES 120 QWRSVDHNTP ALPNTFTFPD NFVFPSNSTS TTQSSMNTVF GFLDNSLLDS AFQEHFKRGL 180 EQGTRFLPKH TPFIVDTDST AFSPSFTMVP SVVVKTEPEE SVEGDHFLSV SRRRNRDEEE 240 YEADGRITKT SAAYVDESEL SELLDKVVLG TGLGKGVPPD TALYQNDETL LTNMFGREVR 300 KSGEEVVDLR TLLIHCAQAV ASDSPSFAKQ LVKQIKQHSS PTGDTAQRLA HYFGNALEAC 360 LDGTGFHVYS VASSKRISAK DMIKAYHVYA SVCPFEMIAI MFANKSIYSL AENAKTIHII 420 DFGIRYGFKW PSLISEISRR PGGPPKLRFT GIDQPQPGFR PEERVLETGR RLENYCKRFN 480 VPFEFNAIAR KWDTIRIEDL KIEKNEFVAV NCMFQLERLL DESVVLDNPR DGVLRLIKKA 540 NPDIFVHSIV NGSHDVPFFV SRFREALFHY SAVFDMLDSN LDREDPSRLM FEKELFGQEI 600 MNIIACEGCE RVERPQTYKQ WQLHNMRIGF RLLPLNQKVI DKLKKRWRDD AYNTNFMLEV 660 DGDWVLQGWK GRILHASSCW IPA*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |