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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.005G095000.1 |
Common Name | PHAVU_005G095000g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
Trihelix |
Protein Properties |
Length: 301aa MW: 34005.9 Da PI: 10.3301 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.005G095000.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 52.5 | 1.3e-16 | 28 | 118 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
+W+++ + +Liea e++ +l+rg+l++ +W+ev++ + + +r+ +qCk++++ l+k+yk +k++ ++ +s +t+p+f++l
Phvul.005G095000.1 28 CWSEEATFTLIEAWGERHLELNRGNLRQRHWQEVADTVnarhghAGARSRRTDVQCKNRIDTLKKKYKIEKARVSDS-GDSATTWPFFRRL 117
7*************************************9888755556689*********************99985.778889*****99 PP
trihelix 86 e 86
e
Phvul.005G095000.1 118 E 118
7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 301 aa
Download sequence Send
to blast |
MDSIAGAPPH TANPPPSRPS PFPGREDCWS EEATFTLIEA WGERHLELNR GNLRQRHWQE 60 VADTVNARHG HAGARSRRTD VQCKNRIDTL KKKYKIEKAR VSDSGDSATT WPFFRRLEFL 120 VGDNFPAKKP SPPEATSGDR RSTPPAKSPS WALIPVGPRS RSQKRPTPAA PAAESVADSY 180 FRRNFSVFAA AAAAAAEADS DNSNGSKWSS GSEKREKKKR ERDWEFGYRE VAEALERFGE 240 IYERVEEAKQ RQMVELEKQR MQFAKDLETQ RMKLFMETQL HLQKMNRSNS KRSSATDSVS 300 *
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G58630.1 | 6e-69 | sequence-specific DNA binding transcription factors |