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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.005G080200.1 |
Common Name | PHAVU_005G080200g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 302aa MW: 34667 Da PI: 6.4194 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.005G080200.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 74.9 | 1e-23 | 132 | 193 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59
++Dgy WrKYGqK+ ++++ rsYYrCt++ gCp++k+v+r +edp + +tY g+Hn++
Phvul.005G080200.1 132 MEDGYIWRKYGQKMTMNTKYLRSYYRCTHKydqGCPATKQVQRIQEDPPLYRTTYYGHHNCK 193
58***************************99999**************************97 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 302 aa
Download sequence Send
to blast |
MENQPSNGRK AMEEELNKGR YTANQLLQIL VHKSNTRHRD AEVEGLVLPF VEDLVRKVLR 60 SFSNTLLLLN THSDIFDEVV MPTTINDVSS SLKCPNLEDK DGVCKGSINA KRRRVCRKRN 120 APTWEKNSSH LMEDGYIWRK YGQKMTMNTK YLRSYYRCTH KYDQGCPATK QVQRIQEDPP 180 LYRTTYYGHH NCKISLGPEI ILEPASSSDS SMFLSFSTTF PTKEEYQFSS SLFSSTKQEP 240 MEGIPDDCGM HNQLPSSDYH LLDDYELDFN CLRYDTMQSM LSSTESVQFD KVYGSGMDFD 300 G*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC254324 | 0.0 | AC254324.1 Phaseolus vulgaris cultivar G19833 clone PV_GBb015-K06, complete sequence. |