 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Phvul.005G079400.1 |
| Common Name | PHAVU_005G079400g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
| Family |
BES1 |
| Protein Properties |
Length: 326aa MW: 35280.4 Da PI: 8.3732 |
| Description |
BES1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.005G079400.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF822 | 216.6 | 5.9e-67 | 2 | 145 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspe 91
++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gn+klpk++DnneVlkALc+eAGw+ve+DGttyrkg+kple+++++g s+ asp+
Phvul.005G079400.1 2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNFKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPLERMDIVGGSSAASPC 92
5899*************************************************************************************** PP
DUF822 92 sslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150
ss++ +sp++sy++sp sssfpspss+ +++ +a +sl+p+l++ls++sss+
Phvul.005G079400.1 93 SSYH--------PSPCASYNPSPGSSSFPSPSSSPYTNIPNAdgNSLIPWLKNLSTASSSA 145
****........*******************9988887776677**********9988765 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 326 aa
Download sequence Send
to blast |
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNF KLPKHCDNNE VLKALCNEAG 60
WTVEPDGTTY RKGCKPLERM DIVGGSSAAS PCSSYHPSPC ASYNPSPGSS SFPSPSSSPY 120
TNIPNADGNS LIPWLKNLST ASSSASSPKL PHLYLHSGSI SAPVTPPLSS PTARTPRINA 180
EWEDQSVRPG WTRQQHYSFL PSSSPPSPGR QVVDPEWFAG IKLPHVNPTS PTFSLISSNP 240
FAFKEDGLVG SGSRMWTPAH SGTCSPAIAP GTDHNADIPM SEAVSDEFAF GSNMLGLVKP 300
WEGERIHEEF GSDDLELTLG NSKTR*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 5zd4_A | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_B | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_C | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| 5zd4_D | 6e-23 | 6 | 77 | 372 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
| Search in ModeBase |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
