PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.005G068500.1
Common NamePHAVU_005G068500g
Organism
Phaseolus vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bZIP
Protein Properties Length: 333aa    MW: 36897.4 Da    PI: 7.328
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.005G068500.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.13e-11180225550
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Phvul.005G068500.1 180 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 225
                         8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-14176240IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703178230IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.2E-14180231No hitNo description
SuperFamilySSF579591.37E-11180234No hitNo description
PfamPF001707.6E-10180224IPR004827Basic-leucine zipper domain
CDDcd147039.91E-22181231No hitNo description
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    Send to blast
MAQLPPKIPT IPQNWPSFPH QRVPTMANFT PTTSSTTTST AAAATTPSQP SWVDEFLDFS  60
STRRGAHRRS ASDSIAFLET PFLEECRAGF DRLDEDQLIS MFSDDIAAAA LPPPPLSSAS  120
NPSSPSSDQN SNNEEKPMAM ALDVKPKTES VEEESSCRNE AAALQLSATA TCAETVVDPK  180
RVKRILANRQ SAQRSRVRKL QYISELERSV TTLQTEVSAL SPRVAFLDHQ RLILNVDNSA  240
LKQRIAALAQ DKIFKDAHQE ALKKEIERLR QIYHQQNLQK MSNTVNNNLQ TAPTSQQPQA  300
PMQSHSLHQH QHQHQMTVSQ PLGCKDKEQL LS*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.005G068500.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150400.0AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007149416.10.0hypothetical protein PHAVU_005G068500g
SwissprotQ9M2K41e-101BZP61_ARATH; Basic leucine zipper 61
TrEMBLV7BWJ00.0V7BWJ0_PHAVU; Uncharacterized protein
STRINGXP_007149416.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.13e-98bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]