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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.005G005800.2 |
Common Name | PHAVU_005G005800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 741aa MW: 80203.7 Da PI: 6.2948 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.005G005800.2 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 100.6 | 9.3e-32 | 313 | 370 | 2 | 60 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60
dDgynWrKYGqK+vkgse+prsYY+Ct+++C+vkkkvers+ +++++ei+Y+g+H h+k
Phvul.005G005800.2 313 DDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSH-EGHITEIIYKGTHSHPK 370
8****************************************.***************85 PP
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2 | WRKY | 102.8 | 2e-32 | 529 | 587 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
ldDgy+WrKYGqK+vkg+++prsYY+Ct agC+v+k+ver+++d k v++tYeg+Hnh+
Phvul.005G005800.2 529 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHD 587
59********************************************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009555 | Biological Process | pollen development |
GO:0009942 | Biological Process | longitudinal axis specification |
GO:0030010 | Biological Process | establishment of cell polarity |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 741 aa
Download sequence Send
to blast |
MAGIDDNVAL TGDWGLASPS PRTFFSRMLE EDHVTRSVSE HSGSGRTGEF FSGPHEPSET 60 GKKNMQDGAE DGDSGPQKLN SRGGLVERMA ARAGFNAPRL NTESMRTTDL SLNSDIHSPY 120 LTIPPGLSPT TLLDSPVFLA NSLAQPSPTT GKFLFMSNGN MRHSELSSDA PEKCKDNGFD 180 DIYASSFAFK PATDSGSSFY HGAGRKINPT TVPQQSRHGI EVSAQSENSF HSQSVDAVKV 240 QTENRSGLHL QADFVESPPE KDIKMFAADQ RAFDAVGGGI EHSTPVEEHG DEEGDQRGNG 300 DSVTGGVGGT PSDDGYNWRK YGQKQVKGSE YPRSYYKCTH PNCQVKKKVE RSHEGHITEI 360 IYKGTHSHPK PPPNRRSGIG SVNPHTEMQV DNPEHVESHN GGEGDMDWGN VQKGNVAGAG 420 NWKHENLEAT SSASIGPEYC NQSTNLQSQN AGTLIDSGEA VDASSTFSNE EEEDDRGTHG 480 SVSLGYDGEG DESESKRRKL ESYADLSGAT RAIREPRVVV QTTSEVDILD DGYRWRKYGQ 540 KVVKGNPNPR SYYKCTNAGC TVRKHVERAS HDLKSVITTY EGKHNHDVPA ARASSHVNAN 600 TSSAGQASGV LHTHVHRPES SQVHNGMGRL ERPSLGSFNL PGRQQLGHSH GFSFGMNQSM 660 LSDLAMSGLG HMQAKLPVMP VHPFLAQQQQ QQQQQNPSND FGFMMPKGEP NVEGGGGLNL 720 PNGSSVYQEI MSRMPLGPHM *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Regulates WOX8 and WOX9 expression and basal cell division patterns during early embryogenesis. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Required to repolarize the zygote from a transient symmetric state. {ECO:0000269|PubMed:21316593}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015040 | 0.0 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |