 |
Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Phvul.004G157100.1 |
| Common Name | PHAVU_004G157100g |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
| Family |
LBD |
| Protein Properties |
Length: 294aa MW: 32004.9 Da PI: 9.5477 |
| Description |
LBD family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Phvul.004G157100.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF260 | 52.1 | 1.9e-16 | 83 | 162 | 20 | 99 |
DUF260 20 pyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallke 99
++ p++q++++ +++k++G++ +l+ll+++p + ++++++ l+yeA+ r+ dPv G++g++++++++l++++a ++l ++
Phvul.004G157100.1 83 EICPESQSNATLFLAKFYGRQGLLNLLSDAPSHLQPAVFKYLLYEACGRMVDPVFGSTGLLSTGNWHLCEAAATAVLSGA 162
55699******************************************************************999887665 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MVLQITQIQM KVRVCVNSRR LGRETRKQKE KVVCVLFMRC RLFQIQCSLR VYRSGSHSHP 60
KPLAAPTVPH RNLDFMNSLV VKEICPESQS NATLFLAKFY GRQGLLNLLS DAPSHLQPAV 120
FKYLLYEACG RMVDPVFGST GLLSTGNWHL CEAAATAVLS GAPIQQALLD IRHVAKSHKS 180
CGPDSLHRVK SQTSKFKRRP AKPKVDSTVA ELAESELDGQ GSLSHDSVSG LTRTSENKIV 240
GGEADSSCSE NVVEPAATND GEIELQLTLG WGPVKKSTTV MLPRVGINLS GNT*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AP015044 | 7e-87 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |
