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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.004G156700.1 |
Common Name | PHAVU_004G156700g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
NAC |
Protein Properties |
Length: 327aa MW: 36624.3 Da PI: 7.4572 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.004G156700.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 176.8 | 6.2e-55 | 8 | 134 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lppGfrFhPtdeel+++yL++kv++++++ ++i+ vd++k+ePwdLp k++ +ekewyfFs rd+ky+tg r+nrat+sgyWk+tgkdke
Phvul.004G156700.1 8 LPPGFRFHPTDEELITCYLTNKVSDSSFTS-KAIAVVDLNKSEPWDLPGKASMGEKEWYFFSLRDRKYPTGLRTNRATESGYWKTTGKDKE 97
79*************************999.88***************988999************************************* PP
NAM 92 vlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
++ +g lvg+kktLvfy+grap+gek++Wvmheyrle
Phvul.004G156700.1 98 IFG-NGVLVGMKKTLVFYRGRAPRGEKSNWVMHEYRLE 134
***.9*******************************85 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 327 aa
Download sequence Send
to blast |
MNLMEENLPP GFRFHPTDEE LITCYLTNKV SDSSFTSKAI AVVDLNKSEP WDLPGKASMG 60 EKEWYFFSLR DRKYPTGLRT NRATESGYWK TTGKDKEIFG NGVLVGMKKT LVFYRGRAPR 120 GEKSNWVMHE YRLENKHHLR PSKNEWVVCR VFQKSLQVKK PQQTNSSPPE SPCDTVSMAN 180 EFGDFELPNL NSIANSSGGL TNNISGDTFM NADLSNSVNT NMNLAMNWAV ASEVQVPSLP 240 SLPWPSGLLS PTISVNSLLL KALQLRSYQQ REAADHLASY MAQGVCQVVG TDLSSNLRAS 300 SSKVQECMPQ QQQQQQEQPF NLDSIW*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-56 | 3 | 160 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-56 | 3 | 160 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-56 | 3 | 160 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-56 | 3 | 160 | 12 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
3swm_B | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
3swm_C | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
3swm_D | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
3swp_A | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
3swp_B | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
3swp_C | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
3swp_D | 5e-56 | 3 | 160 | 15 | 174 | NAC domain-containing protein 19 |
4dul_A | 4e-56 | 3 | 160 | 12 | 171 | NAC domain-containing protein 19 |
4dul_B | 4e-56 | 3 | 160 | 12 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 1e-158 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |