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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.004G105800.1 |
Common Name | PHAVU_004G105800g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
WRKY |
Protein Properties |
Length: 402aa MW: 44078.5 Da PI: 7.0044 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.004G105800.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 91.4 | 7e-29 | 215 | 273 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D ++WrKYGqK++kgs++pr+YYrC+s gC ++k+vers+++p+++++tY+g+H+h
Phvul.004G105800.1 215 ADSWAWRKYGQKPIKGSPYPRNYYRCSSCkGCAARKQVERSTTEPNTFIVTYTGDHKHA 273
69************************9988****************************7 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 402 aa
Download sequence Send
to blast |
MTHEDWDLFA IVRSCKAATF TATTNTENPP TMTSTTTSFS PNTTSCLDVS QDNGSFSFPN 60 LVQPTTNDFQ ELHQLLINFN PTNTTISSTI TSAVGINPNS TFSDAAGFIG QQHIQQAHHH 120 HLVPAPTNHS SIGAPSTTGF DRFQHHHHHY PHHQQQHQPQ TPEQQQHKQN QPQLQAPQTS 180 PVLSPTTQPQ TPRSRKRKTQ QKKMVCHVTA DNLSADSWAW RKYGQKPIKG SPYPRNYYRC 240 SSCKGCAARK QVERSTTEPN TFIVTYTGDH KHAKPVHRNS LAGSTRTKPS PASLPETHEA 300 VSCIKIQNAC SSTSELSTTS LRSGTPENEE MVAAGEPDFL EMEVDPDALS ENDYDLLIPN 360 TGAMSDAVLL GLTNGAETKA SDPNSDSGLT RSKSDPFYNP V*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |