PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.004G095200.1
Common NamePHAVU_004G095200g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family Trihelix
Protein Properties Length: 591aa    MW: 67136.5 Da    PI: 5.318
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.004G095200.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix88.29.5e-2862145186
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                         rW++qe+laL+++r++m+  +r++ lk+plWeevs+k++  g+ rs+k+Ckek+en+ k+ k++ke+++++   + +t+++fdql+
  Phvul.004G095200.1  62 RWPRQETLALLKIRSDMDAVFRDSTLKGPLWEEVSRKLAGLGYDRSAKKCKEKFENVYKYNKRTKESKSGK--SHGKTYKFFDQLQ 145
                         8********************************************************************96..55567******98 PP

2trihelix1032.3e-32408493187
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                         rW+k ev+aLi++r++++++++++  k+plWe++s++m++ g++rs+k+Ckekwen+nk++kk++e++k+r  e+s+tcpyf++l+a
  Phvul.004G095200.1 408 RWPKPEVHALIRLRTSLDTKYQENGPKAPLWEDISIAMQRLGYNRSAKRCKEKWENINKYFKKVRENNKER-RENSKTCPYFHELDA 493
                         8*********************************************************************8.78889********85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.96955119IPR017877Myb-like domain
SMARTSM007170.02959121IPR001005SANT/Myb domain
CDDcd122033.84E-2361126No hitNo description
PfamPF138371.1E-1861147No hitNo description
PROSITE profilePS500907.236401465IPR017877Myb-like domain
SMARTSM007170.11405467IPR001005SANT/Myb domain
PfamPF138377.3E-22407494No hitNo description
CDDcd122031.55E-25408472No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 591 aa     Download sequence    Send to blast
MQPGDSSVLE ISSHNEPEMA VAAEGAAHGG EVDGGDEMIG MDVDAISGEG NEGNKMSFGG  60
NRWPRQETLA LLKIRSDMDA VFRDSTLKGP LWEEVSRKLA GLGYDRSAKK CKEKFENVYK  120
YNKRTKESKS GKSHGKTYKF FDQLQALENQ FTISYPPKPQ PTLATTNTLT LPARQSDVGN  180
NNVISYVTPF PSTNPTLISP SPQTNTPTIS TRDTSPPPQT TTTNNDNVTY SLPNMNTPFS  240
TTTTTSTSSS TASDEDLEER YRRKRKWKDY FRRLTRKVLL KQEEMQKKFL EAMDKRERER  300
VTQQDNWRMQ EMARINREHE ILVQERSTAA AKDAAVIALL QKMYGQQNTT QHVQVQPPEQ  360
QKQTMLQSEA PTLMSNNNHF EIKKMNNGHS ATGISTTTVT TSPASSSRWP KPEVHALIRL  420
RTSLDTKYQE NGPKAPLWED ISIAMQRLGY NRSAKRCKEK WENINKYFKK VRENNKERRE  480
NSKTCPYFHE LDAIYKEKSL SQNPFGVFQN MKPNEMMMME PLMVQPEQQW RPPPQSLEEG  540
TEKNGSEEYQ KKEEENGDGG NDDDDDDVDD DVEEDEDGVE DEACETGTNN *
Cis-element ? help Back to Top
SourceLink
PlantRegMapPhvul.004G095200.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150440.0AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007152025.10.0hypothetical protein PHAVU_004G095200g
TrEMBLV7C1J10.0V7C1J1_PHAVU; Uncharacterized protein
STRINGXP_007152025.10.0(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37334181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-117Trihelix family protein