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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Phvul.004G083100.1 |
Common Name | PHAVU_004G083100g |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Family |
GATA |
Protein Properties |
Length: 337aa MW: 36453.7 Da PI: 5.8693 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.004G083100.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 57.6 | 1.8e-18 | 242 | 275 | 1 | 34 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
C++C tkTp+WR gp g+ktLCnaCG++y++ +
Phvul.004G083100.1 242 CVHCEITKTPQWRAGPMGPKTLCNACGVRYKSGR 275
*******************************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 337 aa
Download sequence Send
to blast |
MIGNFIDDID CGSFFDQIDD LLEFPAEETA AIDTTAVAPL APPTNFWSAE SDSFHAANAV 60 FSGNTVPDLS TELSVPYEDI VQLEWLSNFV EDSFSGGSLT MQQEQPQCTN KEDITHAQFQ 120 TASPVSVLES SSFCSGEKAV PRSPEIFIPV PCGRARSKRA RPTAFNPHPV MQLISPASST 180 GENTQHNTST CKASSDSENF AESPIKTPKQ AFGEHKKKKK IKVTFSAGQD QNGSPSQAVR 240 KCVHCEITKT PQWRAGPMGP KTLCNACGVR YKSGRLFPEY RPAASPTFCA AVHSNSHKKV 300 LEMRNKSDTK SGFAADSASS PELIPNTNSS LSLEYM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 0.0 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |