|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Phvul.004G075500.1 |
Common Name | PHAVU_004G075500g |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
|
Family |
NAC |
Protein Properties |
Length: 211aa MW: 24028.8 Da PI: 9.469 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Phvul.004G075500.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 98.4 | 1.1e-30 | 15 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91
lp GfrF Ptd+el+ +yLk+k+ + +l++ +vi+++d+++++Pw Lp + +++ yfFs+ k +++++ sg Wk gk+ke
Phvul.004G075500.1 15 LPIGFRFCPTDQELLLHYLKNKAFALQLPA-SVISDCDVFQTDPWLLPGDL---REKRYFFSNCGKV------NKKSAGSGCWKCVGKEKE 95
699***************************.99***************544...4578****98775......4567899*********** PP
NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ + ++e++g+kktL+f kg++ + +t+Wvmh+ rl
Phvul.004G075500.1 96 IRRCeSNEVIGMKKTLMFCKGSNDT--RTRWVMHQLRL 131
*98757788**********887776..9*******886 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MERLQGFVVK GGIKLPIGFR FCPTDQELLL HYLKNKAFAL QLPASVISDC DVFQTDPWLL 60 PGDLREKRYF FSNCGKVNKK SAGSGCWKCV GKEKEIRRCE SNEVIGMKKT LMFCKGSNDT 120 RTRWVMHQLR LLTSYPYQQM AVGDFAVYVI FQKRKKTKTS NRRVSSSRKL ERVDDVKASM 180 MDFKVEFGDD NIELPPPSSP SLSEDCSETT *
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-21 | 13 | 132 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-21 | 13 | 132 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-21 | 13 | 132 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-21 | 13 | 132 | 15 | 143 | NO APICAL MERISTEM PROTEIN |
4dul_A | 1e-21 | 13 | 132 | 15 | 143 | NAC domain-containing protein 19 |
4dul_B | 1e-21 | 13 | 132 | 15 | 143 | NAC domain-containing protein 19 |
Search in ModeBase |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | AP015044 | 3e-85 | AP015044.1 Vigna angularis var. angularis DNA, chromosome 11, almost complete sequence, cultivar: Shumari. |